Transcript Information: R_Transcript_47702.p1


Annotated TAIR IDAT1G20823.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7238880-7239473 | Forward length=197
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.7003712387
Replicate 29.582204216834
Replicate 313.067601984382
Condition 2: 8 Hour
Replicate 111.585593817321
Replicate 213.731682472943
Replicate 314.862392588505
Condition 3: 24 Hour
Replicate 121.031816688467
Replicate 216.282405892372
Replicate 321.079769278992


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47702.p1 GENE.R_Transcript_47702~~R_Transcript_47702.p1 ORF type:complete len:298 (+),score=28.13,zf-RING_2|PF13639.2|3.3e+03,zf-RING_2|PF13639.2|2.2e-13,zf-RING_11|PF17123.1|5.9e-11,zf-rbx1|PF12678.3|8.2e-10,zf-C3HC4|PF00097.21|7.2e+03,zf-C3HC4|PF00097.21|6e-08,zf-ANAPC11|PF12861.3|6e-06 R_Transcript_47702:861-1754(+)
ATGGCGCCATTTTTACCCACTACCCCTTTACCCACCACCACCCTACCAACAACCATCGGAGCTCCACAACCATGGCCGCCACCACCAACCTCATCAAACTCCAACACCAAAACCTTCAAAGACTGCTCACAAGCCATCTGCTCAATCACCTGTCCTCAATGGTGCAACTACCTCATCCTCCCACCACCCCCTCCTTTTGACGATGACTCCTCCGATGACTCCTCCTCCTCGTCTCGGATCTCCCCTCTCATGGCCGCCCTGATCGCCGTCCTCGCCGCCGCCTTCCTCCTTCTCTTCTACTACACCGTTATCTCCCGCCTCTGCCGCCGCCGCCGCAACCTACGCCACCTCAACCACCACGACCCGATCCTCGACCCCGAGGCCCGGCTCGACCCGATGGTCCAGGACCCGTCCCGGCCCGGAACGGGTACGGGCCTCGACGAGAGCTTCATCCGGCAGATCACCGTGTTCAAGTATCGGCGTTCGGACGGCCTCGTGGAGGGCACCGAGTGCGCCGTCTGCCTCAACGAGTTCAAGGAGGATGAAAGCTTGAGGCTCATGCCGAATTGCGAGCATGCTTTTCATATCCCATGTATTGACACGTGGCTCAAGTCCCAGTCCAATTGCCCCCTCTGCCGGGCCTCCATGAACCCGGCCCCGCCCGCCCGTCCTGTGAACCCGGGCCCGGTAACTGGGCCCGTCACTGGCGTGGCGGCGATGCGGGTGGAGAGAGGTGGGGATGCGGTGCTGGTGATAAGGGAGTTGGAGAGGGATCAAGTGATTAATGTTTGTCATGGGAGATCTGGAGAGGAGAGAGAAGGTGGTAATGGTGAAGAAAGAGCTGAGGAGAGAGAAAATGGTAATGGTGAGGAGGTCAGGAAAGGGAATTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47702.p1 GENE.R_Transcript_47702~~R_Transcript_47702.p1 ORF type:complete len:298 (+),score=28.13,zf-RING_2|PF13639.2|3.3e+03,zf-RING_2|PF13639.2|2.2e-13,zf-RING_11|PF17123.1|5.9e-11,zf-rbx1|PF12678.3|8.2e-10,zf-C3HC4|PF00097.21|7.2e+03,zf-C3HC4|PF00097.21|6e-08,zf-ANAPC11|PF12861.3|6e-06 R_Transcript_47702:861-1754(+)
MAPFLPTTPLPTTTLPTTIGAPQPWPPPPTSSNSNTKTFKDCSQAICSITCPQWCNYLILPPPPPFDDDSSDDSSSSSRISPLMAALIAVLAAAFLLLFYYTVISRLCRRRRNLRHLNHHDPILDPEARLDPMVQDPSRPGTGTGLDESFIRQITVFKYRRSDGLVEGTECAVCLNEFKEDESLRLMPNCEHAFHIPCIDTWLKSQSNCPLCRASMNPAPPARPVNPGPVTGPVTGVAAMRVERGGDAVLVIRELERDQVINVCHGRSGEEREGGNGEERAEERENGNGEEVRKGNC*

Click here to download the sequence:
Link to NCBI Protein BLAST