Transcript Information: R_Transcript_477033.p1


Annotated TAIR IDAT3G11710.1
Annotated Gene Namelysyl-tRNA synthetase 1
Annotated Gene Symbol(s)ATKRS-1
Annotation TypeOrtholog
Chromosome Positionchr3:3702359-3705613 | Reverse length=626
E-Value3.4E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11198135555042
Replicate 20.38643497698708
Replicate 30.28106426498346
Condition 2: 8 Hour
Replicate 10
Replicate 20.13718332417905
Replicate 30
Condition 3: 24 Hour
Replicate 10.14084544311475
Replicate 20
Replicate 30.26856079370426


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_477033.p1 GENE.R_Transcript_477033~~R_Transcript_477033.p1 ORF type:5prime_partial len:163 (+),score=22.59,tRNA-synt_2|PF00152.16|3.1e-30 R_Transcript_477033:3-491(+)
GGCGTTGAGTGCCCTCCACCTCGGACTACTTCTCGTTTACTCGATAAATTAGTCGGTGAAATTATTGAACCAACCTGTACCAACCCTACTTTTATTATTAACCACCCCACTGTCATGTCACCTCTTGCTAAATGGCATCGATCAATCAAAAATGCAACAGAACGATTTGAATTATTCTGTGTCGGACGAGAAATTTGCAATGCATACACTGAGTTAAACGAACCCAGAATTCAAAGACAAAGATTCACTGAACAATCAAAAGATAAAGCAATGGGTGACGAAGAAGCTCAACTTGTTGATGAAACTTTCTGCACTGCCCTTGAATATGGTCTTCCACCCACTGGTGGTTGGGGAATGGGAATTGATCGATTGTGTATGCTCCTTACCGACAACAACAATATCAAAGAAGTTATTTTATTTCCTGCAATGAAACCCCAAGAAGATGTTGCACCAACCAATAATAATAATAATAACAATACTCAACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_477033.p1 GENE.R_Transcript_477033~~R_Transcript_477033.p1 ORF type:5prime_partial len:163 (+),score=22.59,tRNA-synt_2|PF00152.16|3.1e-30 R_Transcript_477033:3-491(+)
GVECPPPRTTSRLLDKLVGEIIEPTCTNPTFIINHPTVMSPLAKWHRSIKNATERFELFCVGREICNAYTELNEPRIQRQRFTEQSKDKAMGDEEAQLVDETFCTALEYGLPPTGGWGMGIDRLCMLLTDNNNIKEVILFPAMKPQEDVAPTNNNNNNNTQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST