Transcript Information: R_Transcript_47711.p1


Annotated TAIR IDAT1G23980.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8484879-8485988 | Reverse length=369
E-Value9E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5581795936955
Replicate 20.64013111025299
Replicate 31.2570770632035
Condition 2: 8 Hour
Replicate 11.3437364910074
Replicate 21.9088557669305
Replicate 32.4349721563934
Condition 3: 24 Hour
Replicate 11.6798395532466
Replicate 21.8827660028542
Replicate 31.067692911556


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47711.p1 GENE.R_Transcript_47711~~R_Transcript_47711.p1 ORF type:complete len:164 (+),score=0.24,zf-RING_2|PF13639.2|6.7e+03,zf-RING_2|PF13639.2|1.3e-09,zf-rbx1|PF12678.3|7.8e+03,zf-rbx1|PF12678.3|5.9e-08 R_Transcript_47711:55-546(+)
ATGGCGCCACCTTTACCCACCACCATCGGAGTTCAACAACCATGCCCGCCACCACCAACTTCATCAATCCCAAACACCGACTGTACACAAGCCATATGCTCAATCACCTGCCCTCAATGGTGCAACTATCTCATCCTTCCTCCACCCCCTCCTTTGGACGATGACTCCTCCTCCCGGATCTCCCCTCTCATGGCCGCCCTGATCGCCGTCCTCGCTGCCGCCTTCCTCCTCCTCCTCTATTACGTCATCCGCCGGCCCCACCCGGTCCCCCCATCCGACCCGGACCCCCCAACCGTCCCGGGAAAGATCATACAGTACAAGCCGTCCGACGGCCCCGTCCTGAACACCGCGTGCTTCTGCAAGGTCGATTTCGTGGAGGATCAGAGGCTGAGGCTCATGCCGAATTGCCGGCATGCTTTTCATATCAATTGTGTTGACCCGTGGCTCAGGTCCAATTCCACCTGCCCCCTCTGCCGCGCCCGGGCTCGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47711.p1 GENE.R_Transcript_47711~~R_Transcript_47711.p1 ORF type:complete len:164 (+),score=0.24,zf-RING_2|PF13639.2|6.7e+03,zf-RING_2|PF13639.2|1.3e-09,zf-rbx1|PF12678.3|7.8e+03,zf-rbx1|PF12678.3|5.9e-08 R_Transcript_47711:55-546(+)
MAPPLPTTIGVQQPCPPPPTSSIPNTDCTQAICSITCPQWCNYLILPPPPPLDDDSSSRISPLMAALIAVLAAAFLLLLYYVIRRPHPVPPSDPDPPTVPGKIIQYKPSDGPVLNTACFCKVDFVEDQRLRLMPNCRHAFHINCVDPWLRSNSTCPLCRARAR*

Click here to download the sequence:
Link to NCBI Protein BLAST