Transcript Information: R_Transcript_47721.p1


Annotated TAIR IDAT1G11750.2
Annotated Gene NameCLP protease proteolytic subunit 6
Annotated Gene Symbol(s)CLPP6
Annotation TypeOrtholog
Chromosome Positionchr1:3967609-3969535 | Forward length=289
E-Value1.7E-130
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.462895569168
Replicate 226.170388733171
Replicate 335.750872605424
Condition 2: 8 Hour
Replicate 128.421093242338
Replicate 231.62467574682
Replicate 337.72941921809
Condition 3: 24 Hour
Replicate 133.780773492193
Replicate 233.870576153387
Replicate 337.130927593844


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47721.p1 GENE.R_Transcript_47721~~R_Transcript_47721.p1 ORF type:complete len:280 (+),score=42.87,CLP_protease|PF00574.19|6.9e-67 R_Transcript_47721:216-1055(+)
ATGGTGGCATCTGCTATCTCAACGTCTTTCACTTGCCCCTCCTCCATTTCTTCTTCCACCAAAACGGCATCGTTTTCGTTTCTCCGCCATAGGAGCTCAAATAAGTCAATTGTATCTGTATTCTCCAATTCCTTCAGCGACTACTTTTCTTCTTCTTCTGACGCTGGGTTATCTAGTAGAAGCAACAGTTTTTCCCTGAAGCTCGGCAAGTCAGGTTTATGTGACACCAGTGTAAGTAATGGCCCCATAGTAGCCAGAAAGGGTAACCCACCGATAATGCCTGCTGTAATGACACCAGGAGGACCTTTAGATCTTTCTACTGTGTTGTTCAGGAACCGGATAATATTTATTGGCCAGCCAATCAATTCCCAAGTGGCCCAGCGGGTTATATCCCAGCTCGTAACTTTGGCAACCATTGATGAAAACTCCGATATACTGATGTATCTTAACTGTCCTGGTGGAAGCACATATTCTGTGTTAGCAATCTATGATTGCATGTCATGGATTAAGCCAAAAGTTGGAACAGTTTGTTTTGGTGTTGCTGCAAGTCAAGGTGCACTTCTCCTTGCTGGAGGTGAGAAGGGAATGCGCTATGCCATGCCAAATTCCCGTATAATGATCCACCAGCCACAGAGTGGATGTGGGGGCCACGTGGAGGATGTCAGGCGTCAAGTCAATGAAGCAGTTCAGTCTCGCCATAAAATTGACAAAATGTATGCTGCTTTTACTGGCCAACCGCTTGAGAAAGTTCAGCAATACACAGAGAGAGATCGTTTCTTGTCAGTTACTGAGGCGATGGAGTTTGGTCTCATAGATGGCATTTTGGAAACAGAGTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47721.p1 GENE.R_Transcript_47721~~R_Transcript_47721.p1 ORF type:complete len:280 (+),score=42.87,CLP_protease|PF00574.19|6.9e-67 R_Transcript_47721:216-1055(+)
MVASAISTSFTCPSSISSSTKTASFSFLRHRSSNKSIVSVFSNSFSDYFSSSSDAGLSSRSNSFSLKLGKSGLCDTSVSNGPIVARKGNPPIMPAVMTPGGPLDLSTVLFRNRIIFIGQPINSQVAQRVISQLVTLATIDENSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQPLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY*

Click here to download the sequence:
Link to NCBI Protein BLAST