Transcript Information: R_Transcript_477216.p2


Annotated TAIR IDAT4G36020.1
Annotated Gene Namecold shock domain protein 1
Annotated Gene Symbol(s)CSDP1
Annotation TypeHomolog
Chromosome Positionchr4:17043443-17044342 | Reverse length=299
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37250940723916
Replicate 20.42849592686323
Replicate 30.3116562938252
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_477216.p2 GENE.R_Transcript_477216~~R_Transcript_477216.p2 ORF type:complete len:147 (+),score=-12.23,zf-CCHC|PF00098.19|3.2e-09,zf-CCHC|PF00098.19|3.6e-08,zf-CCHC|PF00098.19|0.0002,zf-CCHC|PF00098.19|8.4e-08,zf-CCHC_4|PF14392.2|0.43,zf-CCHC_4|PF14392.2|1.1,zf-CCHC_4|PF14392.2|0.19,zf-CCHC_4|PF14392.2|0.057,zf-CCHC_3|PF13917.2|1.8,zf-CCHC_3|PF13917.2|0.031,zf-CCHC_3|PF13917.2|1.5e+02,zf-CCHC_3|PF13917.2|0.11 R_Transcript_477216:38-442(+)
ATGGTTGGTCGTGGCCCTACGTGTTACAACTGCCAGCAGGCTGGTCACATGGCCCGCGACTGCCCTCTGCCTCAGCTTCCTCGCCCCAACGCGAAGCCCGGTGCGCCCGCCACTTCCGCCGCTGGCGCCGTCGCGTCCAAGCCCAAGGCTACGGATGCCGCCTGCTACAACTGCAAGCAGAAGGGTCATTTGGCGCGTGACTGCCCCATGCCCCGCCAGGAGCGCGAGGCCGCTGCCGCCGCTCCCCGCCCCCGCCGCGGCCGTATCACCGGCTGCTTCAACTGCGGCGAGGAGGGCCACGAGGCCAAGGCGTGCACCAAGCCCCGCGCGGACCCTGGCAAGGGCGCGTGCTTCAAGTGCGGCGTGACTGGCCACATGGCTCGCGACTGCACCGCGACGGCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_477216.p2 GENE.R_Transcript_477216~~R_Transcript_477216.p2 ORF type:complete len:147 (+),score=-12.23,zf-CCHC|PF00098.19|3.2e-09,zf-CCHC|PF00098.19|3.6e-08,zf-CCHC|PF00098.19|0.0002,zf-CCHC|PF00098.19|8.4e-08,zf-CCHC_4|PF14392.2|0.43,zf-CCHC_4|PF14392.2|1.1,zf-CCHC_4|PF14392.2|0.19,zf-CCHC_4|PF14392.2|0.057,zf-CCHC_3|PF13917.2|1.8,zf-CCHC_3|PF13917.2|0.031,zf-CCHC_3|PF13917.2|1.5e+02,zf-CCHC_3|PF13917.2|0.11 R_Transcript_477216:38-442(+)
MVGRGPTCYNCQQAGHMARDCPLPQLPRPNAKPGAPATSAAGAVASKPKATDAACYNCKQKGHLARDCPMPRQEREAAAAAPRPRRGRITGCFNCGEEGHEAKACTKPRADPGKGACFKCGVTGHMARDCTATA*

Click here to download the sequence:
Link to NCBI Protein BLAST