Transcript Information: R_Transcript_47722.p1


Annotated TAIR IDAT1G11750.2
Annotated Gene NameCLP protease proteolytic subunit 6
Annotated Gene Symbol(s)CLPP6
Annotation TypeOrtholog
Chromosome Positionchr1:3967609-3969535 | Forward length=289
E-Value1.2E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8239019388597
Replicate 21.9607440077477
Replicate 35.4370077562852
Condition 2: 8 Hour
Replicate 13.5252023464906
Replicate 23.3062782488913
Replicate 33.3901840847415
Condition 3: 24 Hour
Replicate 13.9305195253657
Replicate 23.1752707352193
Replicate 37.1539579521376


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47722.p1 GENE.R_Transcript_47722~~R_Transcript_47722.p1 ORF type:complete len:257 (+),score=29.94,CLP_protease|PF00574.19|1.5e-48 R_Transcript_47722:216-986(+)
ATGGTGGCATCTGCTATCTCAACGTCTTTCACTTGCCCCTCCTCCATTTCTTCTTCCACCAAAACGGCATCGTTTTCGTTTCTCCGCCATAGGAGCTCAAATAAGTCAATTGTATCTGTATTCTCCAATTCCTTCAGCGACTACTTTTCTTCTTCTTCTGACGCTGGGTTATCTAGTAGAAGCAACAGTTTTTCCCTGAAGCTCGGCAAGTCAGGTTTATGTGACACCAGTGTAAGTAATGGCCCCATAGTAGCCAGAAAGGGTAACCCACCGATAATGCCTGCTGTAATGACACCAGGAGGACCTTTAGATCTTTCTACTGTGTTGTTCAGGAACCGGATAATATTTATTGGCCAGCCAATCAATTCCCAAGTGGCCCAGCGGGTTATATCCCAGCTCGTAACTTTGGCAACCATTGATGAAAACTCCGATATACTGATGTATCTTAACTGTCCTGGTGGAAGCACATATTCTGTGTTAGCAATCTATGATTGCATGTCATGGATTAAGCCAAAAGTTGGAACAGTTTGTTTTGGTGTTGCTGCAAGTCAAGGTGCACTTCTCCTTGCTGGAGGTGAGAAGGGAATGCGCTATGCCATGCCAAATTCCCGTATAATGATCCACCAGCCACAGAGTGGATGTGGGGGCCACGTGGAAGATGTCAGGCGTCAAGTCAACGAAGCAGTTCAATCTCGTCATGTTAGTATCAATATCAATCCCTGTACCTTATCTTGGAATTTTGGAGTAGTCAAAATTGTTGCTGAAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47722.p1 GENE.R_Transcript_47722~~R_Transcript_47722.p1 ORF type:complete len:257 (+),score=29.94,CLP_protease|PF00574.19|1.5e-48 R_Transcript_47722:216-986(+)
MVASAISTSFTCPSSISSSTKTASFSFLRHRSSNKSIVSVFSNSFSDYFSSSSDAGLSSRSNSFSLKLGKSGLCDTSVSNGPIVARKGNPPIMPAVMTPGGPLDLSTVLFRNRIIFIGQPINSQVAQRVISQLVTLATIDENSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHVSININPCTLSWNFGVVKIVAEN*

Click here to download the sequence:
Link to NCBI Protein BLAST