Transcript Information: R_Transcript_47732.p1


Annotated TAIR IDAT5G58450.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23626826-23632071 | Forward length=1065
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.155772251533
Replicate 27.7007080189569
Replicate 311.509678379188
Condition 2: 8 Hour
Replicate 110.256615995601
Replicate 210.751692448712
Replicate 314.921087982934
Condition 3: 24 Hour
Replicate 115.079464334421
Replicate 210.474621479006
Replicate 314.462672123496


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47732.p1 GENE.R_Transcript_47732~~R_Transcript_47732.p1 ORF type:complete len:1017 (+),score=193.78,NatB_MDM20|PF09797.5|1.7e+03,NatB_MDM20|PF09797.5|2.2e-54,TPR_9|PF13371.2|0.39,TPR_9|PF13371.2|0.0092,TPR_16|PF13432.2|0.028,TPR_16|PF13432.2|2.6e+03,TPR_16|PF13432.2|1.4,TPR_16|PF13432.2|3,NARP1|PF12569.4|1,NARP1|PF12569.4|0.0026,TPR_19|PF14559.2|0.04,TPR_19|PF14559.2|26,TPR_19|PF14559.2|2.1e+02,TPR_19|PF14559.2|1,TPR_19|PF14559.2|1.6e+04,TPR_19|PF14559.2|1.6e+04,ANAPC3|PF12895.3|0.0043,ANAPC3|PF12895.3|5 R_Transcript_47732:265-3315(+)
ATGTCGAATTCCCTGGCCGGAAAGTTTGGGTATGCCGGAGGCATGCCGGAGCGAAAAGTCCGGCCGATTTGGGACGCTATTGATTCTCGCCAGTACAAGAACGCTCTTAAGCTCTCTTCTGCTCTTCTCACTAAGTACCCTAATCTTCCTTACGCCATGGCACTAAAAGCTCTTATTTTGGAAAGAATGGGGAAACCTGAAGAAGCACTATCCATCTGCCTCGAAGCAAAAGAGCTGTTGCATAAAAATGTTACTCTGTTGATGGATGATCTTACACTCAGCACCTTGCAGATTGTGTTTCAAAGACTTGACCGCTTGGATTTGGCGACAAGCTTGTATGATTATGCCTGTGGAAAAATTCCAAATAATCTGGAGTTAATGATGGGGCTTTTCAATTGTTATGTTCGTGAATATGCATATGTGAAACAGCAACAGACAGCTATTAAAATGTACAAGCTTGTTGGTGAAGAAAGGTTCTTGCTGTGGGCAGTTTGTAGTATACAGCTTCAGGTTAGTTGTGGCCAAGGAGGAGAAAAGTTGTTAGGCTTAGCAGAAGGTTTACTTAAAAAGCACATCGGTTCCCACAGTCTGCATGAACCAGAAGCCCTTATGGTATACATATCTGTGCTGGAACAACAAGGCAAATATTGTGACGCACTAGAGATTCTATCTGGAAAATTGGGGTCACTTATCCTGATTGATGTTGAGCGGCTTCGCTTGCAGGGTAGACTGCTTGCTCAGTCAGGCGACAATGCTGCTGCTGCTAGTACATTCCAGAAGATCCTAGAATCATGCCCTGATGACTGGGAGTGTTTCCTACATTATCTAGGATGTTTGCTGGAGGATGACCAGAACTGGTGCAGTGGGTCAACTAGTGAACCAAGGTGTCCTCCAAAATCCGTGGACAAGCCCGCGCATGTGACAGAAGATGTGTTTGATTCTCGTATACAAGATGCATCAACTTTTGTGCAGAAGTTACAAGCAGAGGCTATTGATGATCCTAAGAGGGGCCCTTATTTGGCTTCTCTTGAAATTGAACGGAGGAAACACTTACATGGCAAATTGGATAGGGAGAAATTCATTGATGCTATCGTGCAGTATTTTTCCAGATTCGGCTACCTAGCTTGTTTTTGTTCTGATGTTGAATTGTTTCTTGACATCTTGAGTCCTGATGAGAAAATGAGATTGCTAGAAAATCTCAACAAGAGCTGTGCATCCATGGCAATGGTGCCTACAAAATCCCTTGGTCAATCATTAAGTCTTCAGAAGATACAACTGGAAACCGGCAATCACAACAATTTTCCGGCAGGTGATCTTGGGAGTTTTGCAGTGAAGATGGTTCAGATGTATTGTGAAAATCTCTTTCTTTCAAAGGACTTGGATCCACAAGAGAGTCTGCATGGTGAGGAGCTCCTATCCATGGCATCCAGTATATTGGTTCAGCTATTTTGGCGAACCGGTAATGTTGGCTATTTGCTGGAGGCTGTTATGGTGCTGGAATTAGGATTAGCTATCAGGAGGTTTGTGTCCCAGTACAAGACATTGCTGGTACACTTGTATTCTTATTTGGGTGCTCTTCCGGTGGCATATGAATGGTATCGAACATTGGATGTGAAAAATATTCTTTTTGAGACTATGTCACACCAAATTCTGCCACAGATGTTGATATCTCCTCTTTGGGAAGATTTAAATGATATTTTGCGGGATTATCTAAAGTTCATGGATGACTACCTTAGAGAATCTGCAGACCTTACATTTCTTGCATATCGCCATCGGAATTACTCAAAAGTAATTGAGTTTGTCCTGTTCAAAGAGCGTCTGGAACATTCTAATCAGTTTCTGGCTGCCAGGCTTGAATCAGCTATTCTAAGACTGAAGGAGAAGGCTGATAATATTGAGGAGATAGAGCGTACTCTTGAAAGCTTGAAATGTGGAACACAAGCTCTTGAACTTGCAAGTGAGACTTCATGTAAATCCCTGACATTCAATGAAGACCTGCAGTTAAGACCTTGGTGGACACCGACACCAAAAAAAAATTATCTTTTAGGATCATTTGATGAACTTCCTCATCCTAGAGAAAATTTGCAATATTATAGGGAAGACTGGGAAACAAATGTGCAGAAGACTGTTCAGAAAAGATCTCTTCTTCCTCGGATGATCTATTTGTCTGTTCAGTGTGTTTCAGCTTCTATTAAGGAAAGCATTGAGGCCAATGGTTCTGTATCTGATTCCACTTTTGCTTTGGAAATGAAAACCGTGCTCGAGAACTATGCGAAGATCCTTGGGTTTTCTCTAAAAGAGGCTGTGAAAATTGTGTTCGATGTTGCTGAGGGCAATAAGTCCTTAGAGACTTTTGGCCCAGATGTGATCGATTGGGCAAACTTGGCTGTATTTTTCAATGCATGGAGCTTGGCTTCCCACGAGCCCATGCTTCCAGGGGGTGAAGGAATAACAGGTCCCGTGGTATGTTATTGGCACATGATGAATTCTTTGCTAGAGAAGTGTGTACTGCAAAAGGTCGGAATAACAGGTCCCGTTGTATGTTATCCAGGAGGTGATCTCCCGGTTCTAGTGCAACTAATTACAGAATCTGTGGCTTGGCATAGTCTAGTACTTCAGTCTTACGTTCGCTCATCTCTTCCTTGTGGGAAGAAAAAGAAGAAAAGCGGACATGCAGACATTTGCAGTTCTTCATTATCTCAGGGAGTTCGGGATTCAGTTTTGTCTCTTTATTCTACTGTCCAAGTGGTTGCAAAATGGTTGAGTGAAGAGCTCAACAAAAGGGAGGATGATGCAGTGGACCAGTTGCTCTCCTCTCTTGTGAGTTGTCCACATGAAGGTCCTGGGCAGATATTCCAGGTTCTTAATGATTCAATATCTAGTGCAAACGAGGTTGAACTAGGAGATCGAATCTTCCAAGCAGTTAAGTCTTGGAGTCCGACTGATGTGGCCAGTAAGATGATAAAGGGACAGCGTAGGACATTGTCAGATCTTCTGCAAATCTGCAACTCTAAACTGAAGTTATTGGAGACCTTGAAACAACAATTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47732.p1 GENE.R_Transcript_47732~~R_Transcript_47732.p1 ORF type:complete len:1017 (+),score=193.78,NatB_MDM20|PF09797.5|1.7e+03,NatB_MDM20|PF09797.5|2.2e-54,TPR_9|PF13371.2|0.39,TPR_9|PF13371.2|0.0092,TPR_16|PF13432.2|0.028,TPR_16|PF13432.2|2.6e+03,TPR_16|PF13432.2|1.4,TPR_16|PF13432.2|3,NARP1|PF12569.4|1,NARP1|PF12569.4|0.0026,TPR_19|PF14559.2|0.04,TPR_19|PF14559.2|26,TPR_19|PF14559.2|2.1e+02,TPR_19|PF14559.2|1,TPR_19|PF14559.2|1.6e+04,TPR_19|PF14559.2|1.6e+04,ANAPC3|PF12895.3|0.0043,ANAPC3|PF12895.3|5 R_Transcript_47732:265-3315(+)
MSNSLAGKFGYAGGMPERKVRPIWDAIDSRQYKNALKLSSALLTKYPNLPYAMALKALILERMGKPEEALSICLEAKELLHKNVTLLMDDLTLSTLQIVFQRLDRLDLATSLYDYACGKIPNNLELMMGLFNCYVREYAYVKQQQTAIKMYKLVGEERFLLWAVCSIQLQVSCGQGGEKLLGLAEGLLKKHIGSHSLHEPEALMVYISVLEQQGKYCDALEILSGKLGSLILIDVERLRLQGRLLAQSGDNAAAASTFQKILESCPDDWECFLHYLGCLLEDDQNWCSGSTSEPRCPPKSVDKPAHVTEDVFDSRIQDASTFVQKLQAEAIDDPKRGPYLASLEIERRKHLHGKLDREKFIDAIVQYFSRFGYLACFCSDVELFLDILSPDEKMRLLENLNKSCASMAMVPTKSLGQSLSLQKIQLETGNHNNFPAGDLGSFAVKMVQMYCENLFLSKDLDPQESLHGEELLSMASSILVQLFWRTGNVGYLLEAVMVLELGLAIRRFVSQYKTLLVHLYSYLGALPVAYEWYRTLDVKNILFETMSHQILPQMLISPLWEDLNDILRDYLKFMDDYLRESADLTFLAYRHRNYSKVIEFVLFKERLEHSNQFLAARLESAILRLKEKADNIEEIERTLESLKCGTQALELASETSCKSLTFNEDLQLRPWWTPTPKKNYLLGSFDELPHPRENLQYYREDWETNVQKTVQKRSLLPRMIYLSVQCVSASIKESIEANGSVSDSTFALEMKTVLENYAKILGFSLKEAVKIVFDVAEGNKSLETFGPDVIDWANLAVFFNAWSLASHEPMLPGGEGITGPVVCYWHMMNSLLEKCVLQKVGITGPVVCYPGGDLPVLVQLITESVAWHSLVLQSYVRSSLPCGKKKKKSGHADICSSSLSQGVRDSVLSLYSTVQVVAKWLSEELNKREDDAVDQLLSSLVSCPHEGPGQIFQVLNDSISSANEVELGDRIFQAVKSWSPTDVASKMIKGQRRTLSDLLQICNSKLKLLETLKQQL*

Click here to download the sequence:
Link to NCBI Protein BLAST