Transcript Information: R_Transcript_477382.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value7E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.098664653809291
Replicate 20.22698703152755
Replicate 30
Condition 2: 8 Hour
Replicate 10.3970680802256
Replicate 20.36260889472193
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.11831191722647


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_477382.p1 GENE.R_Transcript_477382~~R_Transcript_477382.p1 ORF type:5prime_partial len:185 (+),score=27.22,RVT_3|PF13456.2|8e-21,RNase_H|PF00075.20|2.4e-07 R_Transcript_477382:2-556(+)
ACTACTCGTCCCTCCAAGAGGAGGCATACAGAATTAATAGCTTGGCAGTCTCCTCCTGATGGGTGGATCACTTTGAACACAGATGGTGCTTGCAAGGGAAACCCCGGTCCTGCTGCTGGTGGTGGACTCATCAGAAACAGTAAGGGTGAACTAATCCGAGCCTTTGCAGCAAAGTATGGTATCTGCTCTATTACTAGGGCAGAAGCGTTGGCTATTTGGCAAGGATTACGTATGGGAAAAGAAGGAGGCTATCGAAGAATCATTATTCGATCCGACTCACAAATAGTCTTGAACATACTCAAATCTGATGAACCATGCACTACTACGCTACAGCATATTATCAAGCAATGCCAATCTCTCATTCACTCGGATGCATGGGAAGTTAGACTGGAGCATTGTCTTCGTGAAGCAAATAGAGCGGCGGACTATCTTGCAAATGTTGGTATAAACCAAGTCACAGACCTCCAATTTTTCGCCTCTCCCCCGCCTGAACTCCAGAGGATCTTGCTTGAAGACATGAGGGCAGTGGCTTGGCCATGTGGGTTTCGTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_477382.p1 GENE.R_Transcript_477382~~R_Transcript_477382.p1 ORF type:5prime_partial len:185 (+),score=27.22,RVT_3|PF13456.2|8e-21,RNase_H|PF00075.20|2.4e-07 R_Transcript_477382:2-556(+)
TTRPSKRRHTELIAWQSPPDGWITLNTDGACKGNPGPAAGGGLIRNSKGELIRAFAAKYGICSITRAEALAIWQGLRMGKEGGYRRIIIRSDSQIVLNILKSDEPCTTTLQHIIKQCQSLIHSDAWEVRLEHCLREANRAADYLANVGINQVTDLQFFASPPPELQRILLEDMRAVAWPCGFRF*

Click here to download the sequence:
Link to NCBI Protein BLAST