Transcript Information: R_Transcript_47747.p1


Annotated TAIR IDAT1G19230.2
Annotated Gene NameRiboflavin synthase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6644189-6649149 | Forward length=934
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9302868924614
Replicate 23.5436793951558
Replicate 34.2527276549819
Condition 2: 8 Hour
Replicate 16.0181503509579
Replicate 210.543580361825
Replicate 39.8416960536697
Condition 3: 24 Hour
Replicate 13.559913146068
Replicate 24.1877073842868
Replicate 33.4632444124837


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47747.p1 GENE.R_Transcript_47747~~R_Transcript_47747.p1 ORF type:complete len:948 (+),score=113.05,NAD_binding_6|PF08030.8|1.1e-47,NADPH_Ox|PF08414.6|3.3e-39,NADPH_Ox|PF08414.6|1.4e+04,FAD_binding_8|PF08022.8|1.6e-28,Ferric_reduct|PF01794.15|1.1e+03,Ferric_reduct|PF01794.15|4e-19 R_Transcript_47747:173-3016(+)
ATGAGGTCTTCATCGGTGGCGAGTAGCCCAAGGCAGTCGTACAACAGCCGTAGGAGCATCGATGATGACCCCACTGCGCCCCACCACCATGACTTCGTGGTGGGGGGCGCAATGCTGCCTGTCTTCCTCAATGATCTCGGCCGGCCGAGCTGCAGTGGTAGCGGTGTGAGTAGTAGGGCTACGAGCTCAAGCCGAGATGAGGAGCTCCTTGAGATCGAGCTCCAGCTTGAGGAAGACAACATTTACGTTTGCAGCGTCACCCCCACGGCTGGCACCCCAAGGGTTGGCGCTGGCCCTGGGGAAGACAGAGCTGCTGGGGGAGGAGGCAGCTTTGGGGGGCTCCTTTCTAAGAGCCCCTCAACTGCCTCCAAGCTCTGGAGGAAGCTCGGGTGGAGGTCCTCCTCCCGGGCCTCATCCAGAGCTTCATCGGAGATAGCGGGTGAAGACCAGCCACCGGTGATGACGGCCACAGAGAAGATGAAATTAAAGGCGCAACTGCAACGGACAAGGTCCGGAGCCCAACGGGCGCTCTCTGGGCTCCGGTTCATCAGCAAAACCACCAACAAGACCGGCAATGGTGCCGCCGAGCTGTGGAACCAGGTCGAAGCGAGGTTCGATCAGCTTGCTGAGAATGGGTTGCTTGACAGAGAAAAATTTGGTGAATGCATTGGAATGGTGGATTCAAAGGAATTTGCAGTGGGAATATTTGATGCATTAGCAAGGAGAAAAAGGCAGAGAATAAAGAAGATAACAAAAGAAGAGTTGCATGATTTTTGGCTGCAACTCTCAGACCAGAGTTTTGATGCTCGTCTTCAGATTTTTTTTGACATGGCTGATAGCAACGAAGATGGAAAAATATCAAGAGACGAAGTCCAAGAGCTTATAATGCTAAGTGCTTCCGCAAATAAACTGTCCACATTGAAGGAAAGGGCCCATGAATATGCAAATTTGATCATGGAAGAACTAGATCCTGATAAACTTGATTACATTGAGTTGTGGCAGTTGGAAGCATTACTGCTACAAAGAGATGTATACATGGAGTATAGTAGGCCACTCAGTACAGTGAGTGGTGGTTGGAGTCAGAACTTGAGCACATTCAGACCGAAGACGATGGTGAGACGAGTAAGCTGCACTTTGAAGTGTCTCATACAGGAAAATTGGCAGAGAGGATGGATTCTGTTGTTGTGGTTCGCTGTCATGGCTTCCCTCTTTACGTGGAAGTTTATTCAGTACAGGCGAAGAGCAGCTTTCAAGGTCATGGGATACTGTCTTTGCACAGCCAAAGGGGCTGCAGAGACGTTGAAGTTCAACATGGCTTTGATCCTTCTACCTGTTTCGAGAAACACCCTCACTTGGCTTCGATCTACACGAGCTAGGATCTTCGTTCCCTTTGATGACAATATCAATTTTCATAAGACAATTGCTGGAGCTATAGTAGTTGGGACACTCCTACATGTGGGAAATCATATAGCATGTGATTTCCCGCGATTGATCAACTGTTCACCCGAGAAATTCTCACTCATAGCCTCTGATTTCAATGATAACAAGCCTACCTATTGGGGGCTTGTTACTGGAATTGAAGGACTTACTGGTATTGCCATGGTGATCTTAATGGCAATATCCTTCACATTGGCAACAAGTCGATTTAGGAAAAATGTAGTGAAGCTACCAGCACCATTCAACCGATTGGCAGGGTACAATGCATTCTGGTACTCCCACCATTTGCTAGCTCTTGTCTATGTCCTGCTATTGGTACACGGGTTCTTCTTGTTCCTGGTACAAACATGGACTAAAAAGACGACATGGATGTATATATCTGTCCCCCTCATTGTCTATATCGCTGAGAGAAGTTTGCGTACATGTAGGTCAGAGATTCGCGCAGTTAAAATCTTGAAGGTGTCAGAGCTACCAGGAAATGTATTCACTCTGATCATGTCAAAGCCACAAGGTTTCAAGTACAAAAGTGGGCAGTACATATTTCTGCAGTGCCCAGCCATTTCAAAATTCGAATGGCATCCTTTTTCTATAACCTCGGCTCCTGGAGACAATTACCTAAGTGTTCACATCCGAATTGTTGGGGACTGGACACAAGAACTAAGACAGGTTTTTACTGAGGGCGGTCAAACTTCAGTATCTTCCATTAGCCGGCTTAAATTTGCAGAAGAGGGCAGCATTCATCAGACAGGTCTACCAAGGCTACATGTTGATGGACCTTATGGCGCCCCAGCACAGGAATACCAGAACTATGATGTTTTGCTCTTAGTGGGGCTCGGAATTGGAGCTACACCCTTCATTAGCATCCTAAAAGATCTTTTAAGCAATGCTAAAGCAGCATCAGACTCAAACACGGATATGAGTATCTCAGACGACAGCTTAAGCAGTTTTGCCTCGACAAATACAGCACACAGTGGAATCAGAAGGCCAATGCGGGTTAAAAATGCTCATTTTTACTGGGTTACTAGGGAGCCTGGCTCTTTCGAGTGGTTCAAAGGGGTGATGGATGAGGTCGCAGAACTAGATCACAAGGGGCTGATTGACATGCACAACTATCTTACTAGTGTCTATGAAGAAGGTGATGCAAGATCAACCCTACTAGCCATGGTCCAAGCTCTGACACATGCTAAGTATGGTGTTGATATTTTGTCTGGTACTCGGGTAAAGACGCATTTCGCAAGACCAAATTGGAAAGAAGTGTTTGCAAAAATTGCTAAAAAACATCCATATTGCACCATAGGTGTATTCTACTGTGGGAGGCCGGTTCTAGCAAAGGAGTTAAGGAAACTAGCTCATGAAATGAGTCACAAAACATCAACACGATTCGAGTTCCACAAAGAGCATTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47747.p1 GENE.R_Transcript_47747~~R_Transcript_47747.p1 ORF type:complete len:948 (+),score=113.05,NAD_binding_6|PF08030.8|1.1e-47,NADPH_Ox|PF08414.6|3.3e-39,NADPH_Ox|PF08414.6|1.4e+04,FAD_binding_8|PF08022.8|1.6e-28,Ferric_reduct|PF01794.15|1.1e+03,Ferric_reduct|PF01794.15|4e-19 R_Transcript_47747:173-3016(+)
MRSSSVASSPRQSYNSRRSIDDDPTAPHHHDFVVGGAMLPVFLNDLGRPSCSGSGVSSRATSSSRDEELLEIELQLEEDNIYVCSVTPTAGTPRVGAGPGEDRAAGGGGSFGGLLSKSPSTASKLWRKLGWRSSSRASSRASSEIAGEDQPPVMTATEKMKLKAQLQRTRSGAQRALSGLRFISKTTNKTGNGAAELWNQVEARFDQLAENGLLDREKFGECIGMVDSKEFAVGIFDALARRKRQRIKKITKEELHDFWLQLSDQSFDARLQIFFDMADSNEDGKISRDEVQELIMLSASANKLSTLKERAHEYANLIMEELDPDKLDYIELWQLEALLLQRDVYMEYSRPLSTVSGGWSQNLSTFRPKTMVRRVSCTLKCLIQENWQRGWILLLWFAVMASLFTWKFIQYRRRAAFKVMGYCLCTAKGAAETLKFNMALILLPVSRNTLTWLRSTRARIFVPFDDNINFHKTIAGAIVVGTLLHVGNHIACDFPRLINCSPEKFSLIASDFNDNKPTYWGLVTGIEGLTGIAMVILMAISFTLATSRFRKNVVKLPAPFNRLAGYNAFWYSHHLLALVYVLLLVHGFFLFLVQTWTKKTTWMYISVPLIVYIAERSLRTCRSEIRAVKILKVSELPGNVFTLIMSKPQGFKYKSGQYIFLQCPAISKFEWHPFSITSAPGDNYLSVHIRIVGDWTQELRQVFTEGGQTSVSSISRLKFAEEGSIHQTGLPRLHVDGPYGAPAQEYQNYDVLLLVGLGIGATPFISILKDLLSNAKAASDSNTDMSISDDSLSSFASTNTAHSGIRRPMRVKNAHFYWVTREPGSFEWFKGVMDEVAELDHKGLIDMHNYLTSVYEEGDARSTLLAMVQALTHAKYGVDILSGTRVKTHFARPNWKEVFAKIAKKHPYCTIGVFYCGRPVLAKELRKLAHEMSHKTSTRFEFHKEHF*

Click here to download the sequence:
Link to NCBI Protein BLAST