Transcript Information: R_Transcript_477574.p1


Annotated TAIR IDAT4G16835.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:9472763-9474803 | Forward length=656
E-Value1E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61874443914301
Replicate 20.88967374645331
Replicate 30.3882497897653
Condition 2: 8 Hour
Replicate 10.2075073300614
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.97278844185187
Replicate 20.56072692094688
Replicate 30.18548902277032


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_477574.p1 GENE.R_Transcript_477574~~R_Transcript_477574.p1 ORF type:3prime_partial len:118 (-),score=27.43,PPR_2|PF13041.2|9.2e-05,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|0.36,PPR|PF01535.16|5.8,PPR|PF01535.16|0.02,PPR|PF01535.16|0.17,PPR_1|PF12854.3|37,PPR_1|PF12854.3|32,PPR_1|PF12854.3|1.6e-05,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|4.9e+03 R_Transcript_477574:3-308(-)
ATGGCTAATGTAGAACCTGATTATATAACCTTTGTTGGTGTACTGAATGCATGTAGCCATACAGGACTTGTTGAAGATGGCTTGAAATATTGGGATAGCATGATTAATAATTACAGGATTGAACCAGATGCTGATCATTATGCTTGCATTGTTGATATGCTTGGGCGTGCTGGTAGACTTGATCAAGCATACAAAATGGTCCAGAGTATGCCAATGGGACCTCGTCCTGGAGCTTTAGGTGCTCTCCTTGCTGCCTGTATTTCCGGTAGCAAGCCTGAAGTGTTGCATACCATGATGGCTGATACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_477574.p1 GENE.R_Transcript_477574~~R_Transcript_477574.p1 ORF type:3prime_partial len:118 (-),score=27.43,PPR_2|PF13041.2|9.2e-05,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|0.36,PPR|PF01535.16|5.8,PPR|PF01535.16|0.02,PPR|PF01535.16|0.17,PPR_1|PF12854.3|37,PPR_1|PF12854.3|32,PPR_1|PF12854.3|1.6e-05,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|4.9e+03 R_Transcript_477574:3-308(-)
MANVEPDYITFVGVLNACSHTGLVEDGLKYWDSMINNYRIEPDADHYACIVDMLGRAGRLDQAYKMVQSMPMGPRPGALGALLAACISGSKPEVLHTMMADT

Click here to download the sequence:
Link to NCBI Protein BLAST