Transcript Information: R_Transcript_47800.p1


Annotated TAIR IDAT5G21280.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7264094-7265514 | Reverse length=302
E-Value2.5E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41907308314405
Replicate 20.53561990857903
Replicate 30.58435555092226
Condition 2: 8 Hour
Replicate 13.5604446479413
Replicate 25.5902204602964
Replicate 37.6403463070506
Condition 3: 24 Hour
Replicate 12.2840675558175
Replicate 22.700643945785
Replicate 33.126814955271


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47800.p1 GENE.R_Transcript_47800~~R_Transcript_47800.p1 ORF type:complete len:392 (+),score=48.79 R_Transcript_47800:56-1231(+)
ATGGCAATTGATAACCTTCCAAGTAGTGGTGAGAGCCGCCTTTCTGGTGCGTATATTCGAAGCCTTGTTAAGCAACTTACGTCTTCAAAGACCCCCAACCCAACTAAAAATGAGAGTGGCGCAATTGAAAGGAATGAACCCTTTTCAACTTGCACTCCTAAGGCTGACAAAACAGGCATGGCTAAGAACCAAAACAACCCACAAGGTCACAAGAAGCAAGTCCGGAGGCGACTCCATACGAGCCGCCCTTACCAAGAGCGGCTCCTAAACATGGCCGAGGCTCGCAAGGAGATCGTCACTGCACTCAAGTTTCATAGAGCCTCCATGAAACAAGCAAACGAGAGAAAAAAACAATCATCGCAACTGCAACCACAACCTCAACCTCAACCATCAAACCAACACCCCCAGTATCAGACAATACTGGGGGTGCAAGGAAATGAATCATCCATGGTATACCCTGATATTCCATATAATTACCCGTCCTATAATTATAATAGTAACAACAATAATAATTCGTACCCTTCTTTTGACACTTATTCCTGGCTTAATTCTTCGTCAGCACTATTGACTAAGCCTCCAACTATTTACGAAAACCTAAACATGCCACTCCCAAACCAACCCTTAGGCCTAAATCTAAACCTCCAAGCTTTCACCAACTTAGACACAAGCTCAATTAGCACCAGTACCCCATCAAATACCAATCATCAAAACAACTCATCTTCCTCATCATCATTCTCCTCGACCCCCAGAGATCCCGGCGAAGCGACGGCTGAAGCCGGGGTGGGGCCCACAAGTAGTGGTGGCATGGATCATGATATGCACCCTGCTTTAGACCAAGAGGAGATGGCCAAGATAAGGTCAATAGGAGATAGGCATCAGATAGTGTGGGATGATACTTTGGACTTGGTTAAGTCAGCTTGGTGGTTTAAGTTCCTTAAAACGACGTCGGTGGAGTTTGATAAGGAAATGAAAGATGGGTCAACGGAAGATAATGATGAAGAGTTATATCATCCATTTGGGGAGTTCATGGAGTTTCCTGCTTGGTTGAGTGCAAATGAAAGCTTCTTGCAGCAACATTTGGATGATTATAGCTCCGAGGACTACACCCAAGATACCACTTTGCCTTGGATGGACATAGAAGACATTGATGGAATGGATGACGAGTGGTTATCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47800.p1 GENE.R_Transcript_47800~~R_Transcript_47800.p1 ORF type:complete len:392 (+),score=48.79 R_Transcript_47800:56-1231(+)
MAIDNLPSSGESRLSGAYIRSLVKQLTSSKTPNPTKNESGAIERNEPFSTCTPKADKTGMAKNQNNPQGHKKQVRRRLHTSRPYQERLLNMAEARKEIVTALKFHRASMKQANERKKQSSQLQPQPQPQPSNQHPQYQTILGVQGNESSMVYPDIPYNYPSYNYNSNNNNNSYPSFDTYSWLNSSSALLTKPPTIYENLNMPLPNQPLGLNLNLQAFTNLDTSSISTSTPSNTNHQNNSSSSSSFSSTPRDPGEATAEAGVGPTSSGGMDHDMHPALDQEEMAKIRSIGDRHQIVWDDTLDLVKSAWWFKFLKTTSVEFDKEMKDGSTEDNDEELYHPFGEFMEFPAWLSANESFLQQHLDDYSSEDYTQDTTLPWMDIEDIDGMDDEWLS*

Click here to download the sequence:
Link to NCBI Protein BLAST