Transcript Information: R_Transcript_478195.p1


Annotated TAIR IDAT1G77440.1
Annotated Gene Name20S proteasome beta subunit C2
Annotated Gene Symbol(s)PBC2
Annotation TypeHomolog
Chromosome Positionchr1:29096334-29098105 | Forward length=204
E-Value4E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52151317013482
Replicate 20
Replicate 30.13089564340658
Condition 2: 8 Hour
Replicate 10
Replicate 20.51110587065567
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.1260300508033
Replicate 30.12507259821084


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_478195.p1 GENE.R_Transcript_478195~~R_Transcript_478195.p1 ORF type:5prime_partial len:175 (+),score=9.62,Proteasome|PF00227.22|2.2e-33 R_Transcript_478195:2-526(+)
AGACAACAAACTGTTGCTACTGATTTCTCAAAAGTATATCACATTACTGAAAAATGCATGGTTGGATTTCCGGGATTAGTGACGGATGCACAAACGATGCACGAAAAATTAAAATTTCGAACAAATTTATACGCGTTAAGAGAAGATAGAGAAATTCAACCAAAAATTATTTCCAATCTTTTATCAACAATGTTATATGAAAGAAGATTTGGCCCTTATTTTGTTGAACCCGTTGTTGCCGGAATAGATAAGAACAATAAACCATTTATTAGCGCCATGGATCTCATTGGGGCTCCTTTATTAGCTGAAGATTTCGTTATTGCTGGAACTGCTACTGAAGCATTATACGGTATTTGCGAAACTTTATTCCGACCTGACTTGGAACCTGAAGATTTATTTGAAGTCATTTCTCAAAGTTTATTGGCTTCGTGCAATCGAGACGCACTAAGTGGTTGGGGTGCAATTGTTCATATTATTACCCCAGAACGAATCATTACTCGCAAACTCAAAGGTAGACAAGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_478195.p1 GENE.R_Transcript_478195~~R_Transcript_478195.p1 ORF type:5prime_partial len:175 (+),score=9.62,Proteasome|PF00227.22|2.2e-33 R_Transcript_478195:2-526(+)
RQQTVATDFSKVYHITEKCMVGFPGLVTDAQTMHEKLKFRTNLYALREDREIQPKIISNLLSTMLYERRFGPYFVEPVVAGIDKNNKPFISAMDLIGAPLLAEDFVIAGTATEALYGICETLFRPDLEPEDLFEVISQSLLASCNRDALSGWGAIVHIITPERIITRKLKGRQD*

Click here to download the sequence:
Link to NCBI Protein BLAST