Transcript Information: R_Transcript_478215.p1


Annotated TAIR IDAT5G53210.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)SPCH
Annotation TypeHomolog
Chromosome Positionchr5:21586606-21588941 | Reverse length=364
E-Value7E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.61214662368113
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_478215.p1 GENE.R_Transcript_478215~~R_Transcript_478215.p1 ORF type:5prime_partial len:120 (+),score=22.82 R_Transcript_478215:3-362(+)
TCTATTACTACTCCCATTGATCTCTCACCTTCTTCTTCAAGCTCTTCTCTTAATGATTCGGTCGCTAACGAGTTGATTGCTAATTCGAGCTCTCCAATGGCTGAGGTTGAAGTCAAGCTCTCTGGCCCTAATGTTCTTGTCAAGACAATATCGCCGCGAATTCCAGGACAAGTTGTGAAGATAATCTCTGCCCTTGAAGATTTATGCCTTGAGATTCTTCATATAAGCATTAGTACCATTGAAGAGACTATGCTTAACTCCTTTACCATCAAGATAGGAATTGAATGCCAGCTGAGTGCTGAGGAGCTTGCTCACCAAATCCAACAAACATTCTGCTCAACTCCACTTATTATCAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_478215.p1 GENE.R_Transcript_478215~~R_Transcript_478215.p1 ORF type:5prime_partial len:120 (+),score=22.82 R_Transcript_478215:3-362(+)
SITTPIDLSPSSSSSSLNDSVANELIANSSSPMAEVEVKLSGPNVLVKTISPRIPGQVVKIISALEDLCLEILHISISTIEETMLNSFTIKIGIECQLSAEELAHQIQQTFCSTPLIIN*

Click here to download the sequence:
Link to NCBI Protein BLAST