Transcript Information: R_Transcript_478517.p1


Annotated TAIR IDAT3G03430.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:814481-814732 | Forward length=83
E-Value7.2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20980414890481
Replicate 21.6893575047596
Replicate 31.0531833377541
Condition 2: 8 Hour
Replicate 11.4072336176578
Replicate 21.0280865214338
Replicate 30.62591760759955
Condition 3: 24 Hour
Replicate 11.055531366791
Replicate 20.5070174457604
Replicate 31.0063312499723


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_478517.p1 GENE.R_Transcript_478517~~R_Transcript_478517.p1 ORF type:complete len:87 (+),score=20.80,EF-hand_1|PF00036.28|2.6e-08,EF-hand_1|PF00036.28|1.9e-08,EF-hand_5|PF13202.2|1.1e-07,EF-hand_5|PF13202.2|5e-07,EF-hand_7|PF13499.2|2.2e-14,EF-hand_6|PF13405.2|8.4e-08,EF-hand_6|PF13405.2|0.00053,EF-hand_8|PF13833.2|0.0011,EF-hand_8|PF13833.2|3.7e-09 R_Transcript_478517:213-473(+)
ATGGCTGGTGAGGATACACCCCAAGACATAGCTGATCGGGAACGGATCTTCAAGCGCTTCGACACAAATGGGGATGGCAAGATATCATCCGCTGAGCTAGGGGAGGCGCTCAAGACGCTTGGTTCTGTTACTAATGATGAAGTAGTAAGGATGATGGCGGAGATTGATACCGATGGTGATGGTTTCATCTCTTTTGAGGAGTTTACCAACTTTGCTCAAGCCAACCGCGGTTTGATTAGAGATGTTGCTAAGATATTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_478517.p1 GENE.R_Transcript_478517~~R_Transcript_478517.p1 ORF type:complete len:87 (+),score=20.80,EF-hand_1|PF00036.28|2.6e-08,EF-hand_1|PF00036.28|1.9e-08,EF-hand_5|PF13202.2|1.1e-07,EF-hand_5|PF13202.2|5e-07,EF-hand_7|PF13499.2|2.2e-14,EF-hand_6|PF13405.2|8.4e-08,EF-hand_6|PF13405.2|0.00053,EF-hand_8|PF13833.2|0.0011,EF-hand_8|PF13833.2|3.7e-09 R_Transcript_478517:213-473(+)
MAGEDTPQDIADRERIFKRFDTNGDGKISSAELGEALKTLGSVTNDEVVRMMAEIDTDGDGFISFEEFTNFAQANRGLIRDVAKIF*

Click here to download the sequence:
Link to NCBI Protein BLAST