Transcript Information: R_Transcript_47878.p1


Annotated TAIR IDAT4G38490.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:18006385-18007203 | Forward length=153
E-Value3E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.449379537334
Replicate 23.639358738825
Replicate 35.6503286070509
Condition 2: 8 Hour
Replicate 13.7544992919109
Replicate 25.2175390962766
Replicate 33.5093113866081
Condition 3: 24 Hour
Replicate 12.6018848191398
Replicate 22.6466310668693
Replicate 35.2530491248554


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47878.p1 GENE.R_Transcript_47878~~R_Transcript_47878.p1 ORF type:5prime_partial len:150 (+),score=26.21,SecE|PF00584.16|2.2e-06 R_Transcript_47878:3-452(+)
TCTGAATTTAGTCAAAGGGTTCGCCGGAAAACTCCAATTCTAACAAAAAAAAGCTGTGTGAAAAAGTGGCTGCTTTTCCATCCCTGCTGTCGAATTCTCCAGATGCCGAGGTTAAAGATTCATGACTCCCTTCACATGAAGCATGTCCGACCCAGATGTGCGGTGTCTAGGGGAGGGAATTATGGTGGTTCAAACTTTGATGACGAGTATCGAGAGGATCCGCTTTGGTTGGAGTTGTCAAGGGAAACATTCAGGGCTTTGAAATCCTTGTTTACTTTCCTTGCTGAGCAGCCTGGCCAGTTGAAGTACCTTGAGTGGCCAAGCTTCCAGGACACGCTGCGGACAGCCACTCTCACTCTTGTACTTGTAGCAGTGCTTATTGTTGCATTATCCTCAATCGATTCTGCTCTTTCCTATGTGTTGGCATTACTTCTCCGAAAACCTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47878.p1 GENE.R_Transcript_47878~~R_Transcript_47878.p1 ORF type:5prime_partial len:150 (+),score=26.21,SecE|PF00584.16|2.2e-06 R_Transcript_47878:3-452(+)
SEFSQRVRRKTPILTKKSCVKKWLLFHPCCRILQMPRLKIHDSLHMKHVRPRCAVSRGGNYGGSNFDDEYREDPLWLELSRETFRALKSLFTFLAEQPGQLKYLEWPSFQDTLRTATLTLVLVAVLIVALSSIDSALSYVLALLLRKPA*

Click here to download the sequence:
Link to NCBI Protein BLAST