Transcript Information: R_Transcript_479087.p1


Annotated TAIR IDAT5G13530.1
Annotated Gene Nameprotein kinases;ubiquitin-protein ligases
Annotated Gene Symbol(s)KEG
Annotation TypeHomolog
Chromosome Positionchr5:4345618-4354369 | Forward length=1625
E-Value6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22169588204112
Replicate 20.085005264843312
Replicate 30
Condition 2: 8 Hour
Replicate 10.09913305646658
Replicate 20
Replicate 30.22046490632049
Condition 3: 24 Hour
Replicate 10.18589317593283
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_479087.p1 GENE.R_Transcript_479087~~R_Transcript_479087.p1 ORF type:internal len:247 (+),score=51.73,Ank_2|PF12796.3|1.9e-05,Ank_2|PF12796.3|5.8e-11,Ank_2|PF12796.3|9.1e-13,Ank_2|PF12796.3|0.0051,Ank_4|PF13637.2|0.03,Ank_4|PF13637.2|5.3e-07,Ank_4|PF13637.2|0.0098,Ank_4|PF13637.2|4.2,Ank_4|PF13637.2|1.2e-15,Ank_5|PF13857.2|1e-06,Ank_5|PF13857.2|5.7e-06,Ank_5|PF13857.2|0.033,Ank_5|PF13857.2|1.7e-06,Ank_5|PF13857.2|6.9e-07,Ank|PF00023.26|3.6e+03,Ank|PF00023.26|0.0012,Ank|PF00023.26|0.078,Ank|PF00023.26|2.4e+03,Ank|PF00023.26|0.56,Ank|PF00023.26|9.3e-06,Ank|PF00023.26|0.00059,Ank_3|PF13606.2|0.00046,Ank_3|PF13606.2|0.0054,Ank_3|PF13606.2|2e+03,Ank_3|PF13606.2|7.9,Ank_3|PF13606.2|0.031,Ank_3|PF13606.2|0.0015 R_Transcript_479087:1-738(+)
GTCAATGCTGCTTGCCTCAAGATGCTTCTCTCTGGAAGACAAAAAGCAAGATTCCATCTCGTGGACAACAGAAAGATGAGTGCTCTTCACTATGCTGCTAAATTTAACAACAGTGCCTGTGTATTGGAGCTCTTGGAAGCTGGAGCAGACGTAAATGTAACCGGGGGATCACACGGAAAGACCACTCCCATCCATCTTGCTGCAGCAAACGATCATTTCGAGACCATGAGACATCTCCTCGAGAATGGTGCAAATTCCAACAAATTGGACTGCTCTGGACAATGTCCTCTCGAAATTGCCATCACATCCAAGGCATCTGAAGAATCCATTGATGAGCTTGTTCGTCATTCAAACACAACCACCCTCTTGCAAAAATGCATGGATAATTGTAGAATACAGAAATACAGAAACATCATTGCAAAGCTTGCAACCAAGGGTGTGGAAATGAGAGTTAGAACTGCCAAGAACAAAACTCCTTTGATGTATGCTGCATCTCTTGGAGATGCTCATTTGATAAGAGTCCTCTGCAGTGTGCCCAAACATCTCGTGGAGGGAGTGAATGCAAGAGACGGAAACTTTCATACTGCATTGCATTCTGCATGTTGTTGGGGATGGGTTGAATGTGCCCAAGTCCTCATTGAAAATGGTGCAGATATTCACGCAACAGATAACAATGGTAACACTCCTCTCCACAGAGCTGCCATGTGGAACAGAGTTGATGTCATCAAGCTTCTCCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_479087.p1 GENE.R_Transcript_479087~~R_Transcript_479087.p1 ORF type:internal len:247 (+),score=51.73,Ank_2|PF12796.3|1.9e-05,Ank_2|PF12796.3|5.8e-11,Ank_2|PF12796.3|9.1e-13,Ank_2|PF12796.3|0.0051,Ank_4|PF13637.2|0.03,Ank_4|PF13637.2|5.3e-07,Ank_4|PF13637.2|0.0098,Ank_4|PF13637.2|4.2,Ank_4|PF13637.2|1.2e-15,Ank_5|PF13857.2|1e-06,Ank_5|PF13857.2|5.7e-06,Ank_5|PF13857.2|0.033,Ank_5|PF13857.2|1.7e-06,Ank_5|PF13857.2|6.9e-07,Ank|PF00023.26|3.6e+03,Ank|PF00023.26|0.0012,Ank|PF00023.26|0.078,Ank|PF00023.26|2.4e+03,Ank|PF00023.26|0.56,Ank|PF00023.26|9.3e-06,Ank|PF00023.26|0.00059,Ank_3|PF13606.2|0.00046,Ank_3|PF13606.2|0.0054,Ank_3|PF13606.2|2e+03,Ank_3|PF13606.2|7.9,Ank_3|PF13606.2|0.031,Ank_3|PF13606.2|0.0015 R_Transcript_479087:1-738(+)
VNAACLKMLLSGRQKARFHLVDNRKMSALHYAAKFNNSACVLELLEAGADVNVTGGSHGKTTPIHLAAANDHFETMRHLLENGANSNKLDCSGQCPLEIAITSKASEESIDELVRHSNTTTLLQKCMDNCRIQKYRNIIAKLATKGVEMRVRTAKNKTPLMYAASLGDAHLIRVLCSVPKHLVEGVNARDGNFHTALHSACCWGWVECAQVLIENGADIHATDNNGNTPLHRAAMWNRVDVIKLLL

Click here to download the sequence:
Link to NCBI Protein BLAST