Transcript Information: R_Transcript_47910.p1


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeHomolog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8643613846806
Replicate 22.3329222684776
Replicate 35.8735224605519
Condition 2: 8 Hour
Replicate 13.76705614573
Replicate 24.0134916125205
Replicate 34.9645430756614
Condition 3: 24 Hour
Replicate 15.2979555140856
Replicate 22.8275972936638
Replicate 35.0510087738994


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47910.p1 GENE.R_Transcript_47910~~R_Transcript_47910.p1 ORF type:internal len:117 (-),score=37.82,Rho_GDI|PF02115.13|8.1e-10 R_Transcript_47910:1-348(-)
GGGTTGTCAAGCTCTAAAAGCATGGGTCTTGATGAGAACAACAACAACAAGCAACAAGAACCTTCTTCTGAGATTTTAAATGGTGCTACTTCTAAAGATAAGCAAGAGCTTGTTCTTAATGAGCCTACAAAAGATAAACTTTCTAGGCAAATGAGTGAGGATTCTATTCTTACTACTGAAGATGATGATGATGAAGAGACTGAGAGGAAAATTTTGAGTCTAGCTATAAAATCCGCTGGTAGGGATGATATATTGCTTCAAATTCCTGAGAATGGGAAGGTGAAGGGCAATTGGTTTACCTTGAAAGAAGGTAGCCGTTACAGCCTCAAGTTTACCTTTCAGGTCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47910.p1 GENE.R_Transcript_47910~~R_Transcript_47910.p1 ORF type:internal len:117 (-),score=37.82,Rho_GDI|PF02115.13|8.1e-10 R_Transcript_47910:1-348(-)
GLSSSKSMGLDENNNNKQQEPSSEILNGATSKDKQELVLNEPTKDKLSRQMSEDSILTTEDDDDEETERKILSLAIKSAGRDDILLQIPENGKVKGNWFTLKEGSRYSLKFTFQVK

Click here to download the sequence:
Link to NCBI Protein BLAST