Transcript Information: R_Transcript_47911.p1


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeOrtholog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value5.1E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.835851111726
Replicate 231.825101024704
Replicate 332.646610274831
Condition 2: 8 Hour
Replicate 131.908745265898
Replicate 234.685777344201
Replicate 335.945906071081
Condition 3: 24 Hour
Replicate 135.611716723289
Replicate 232.99605660795
Replicate 339.380634023276


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47911.p1 GENE.R_Transcript_47911~~R_Transcript_47911.p1 ORF type:complete len:254 (+),score=69.02,Rho_GDI|PF02115.13|2.1e+03,Rho_GDI|PF02115.13|2.7e-80 R_Transcript_47911:652-1413(+)
ATGTCTTTGGCCATTGGGGGGGTGTCAAGCTCTAAAAGCATGGGTCTTGATGAGAACAACAACAACCAACAAGAACCTTCTTCTGAGATTTTAACTGGTACTACTTCTAAAGATCAGCAAGAGCTTGTTCTTAATGAGCCTACAAAAGATAAACTTTCTAGGCAAATGAGTGAGGATTCTATTCTTACTACTGAAGATGATGATGATGAAGAGACTGAGAGGAAAATTGATTTGGGTCCTCAATGCTCTTTGAAGGAACAATTAGAGAAAGACAAGGATGATGAGAGTTTGAGGAAGTGGAAAGAGCAGCTTCTTGGCAGTGTGGACCTTAATGCAATTGGAGAAACTCTTGAACCGGAGGTGAAAATTTTGAGTCTAGCTATAAAATCCCCTGGTAGGGATGATTTTTTGCTTCAAATTCCTGAGAATGGGAAGGTGAAGGGCAATTGGTTTACCTTGAAAGAAGGTAGCCGTTACAGCCTCAAGTTTACCTTTCAGGTCAAGAATAACATAGTTGCGGGGCTTAAGTACACGAACACAGTTTGGAAAACTGCAGTCAAAGTCGATAGCACCAAAGAAATGCTCGGAACTTTTAGCCCTCAAGCAGAGCCATACACACATGAAATGCCTGAGGAGACCACCCCATCAGGCATTTTCGCGAGAGGATCTTATTCGGCTAGGACAAGGTTTGTTGATGACGACAACAAGTGCTACTTGGAGATTAACTATGGATTTGACATTCGTAAGGATTGGCAGCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47911.p1 GENE.R_Transcript_47911~~R_Transcript_47911.p1 ORF type:complete len:254 (+),score=69.02,Rho_GDI|PF02115.13|2.1e+03,Rho_GDI|PF02115.13|2.7e-80 R_Transcript_47911:652-1413(+)
MSLAIGGVSSSKSMGLDENNNNQQEPSSEILTGTTSKDQQELVLNEPTKDKLSRQMSEDSILTTEDDDDEETERKIDLGPQCSLKEQLEKDKDDESLRKWKEQLLGSVDLNAIGETLEPEVKILSLAIKSPGRDDFLLQIPENGKVKGNWFTLKEGSRYSLKFTFQVKNNIVAGLKYTNTVWKTAVKVDSTKEMLGTFSPQAEPYTHEMPEETTPSGIFARGSYSARTRFVDDDNKCYLEINYGFDIRKDWQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST