Transcript Information: R_Transcript_479194.p1


Annotated TAIR IDAT5G13710.1
Annotated Gene Namesterol methyltransferase 1
Annotated Gene Symbol(s)SMT1, CPH
Annotation TypeHomolog
Chromosome Positionchr5:4424048-4426866 | Reverse length=336
E-Value3E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28744820401132
Replicate 20.33065040025666
Replicate 30.90184006284065
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.18077013565121
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_479194.p1 GENE.R_Transcript_479194~~R_Transcript_479194.p1 ORF type:5prime_partial len:127 (+),score=17.65,Sterol_MT_C|PF08498.6|2.6e+03,Sterol_MT_C|PF08498.6|5.8e-20 R_Transcript_479194:1-381(+)
CACCGATTGATCAAGAAAGGCATTGAAGAAGGAGACGGATTACCCGATATCGCCACCACTGATGAAGTCATTGAAGCATTGAAGAATGCTGGGTTTGAACTCCTCTTTGAAGAAGACCGAGCATTAGTTGAAAACGAGACTGATCTTCCTTGGTACCACCCCCTCGAACCCAAATACACCATCACTAACTTTCAACACACTCCACTTGGTCACAGTGCGCTCAGTAAAATGCTGGGTTGGTTGGAAAAGATCAAGTTAGTCAAAGCTGGTTCCGTTGGCGTCCAAGAGTTCTTACACACCGCTGCAGTCTCGCTTGTGAATGGTGGCAAAACTGGCACCTTCACCCCTTCTTTCTTTACTCTCGCTCGCAAACCACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_479194.p1 GENE.R_Transcript_479194~~R_Transcript_479194.p1 ORF type:5prime_partial len:127 (+),score=17.65,Sterol_MT_C|PF08498.6|2.6e+03,Sterol_MT_C|PF08498.6|5.8e-20 R_Transcript_479194:1-381(+)
HRLIKKGIEEGDGLPDIATTDEVIEALKNAGFELLFEEDRALVENETDLPWYHPLEPKYTITNFQHTPLGHSALSKMLGWLEKIKLVKAGSVGVQEFLHTAAVSLVNGGKTGTFTPSFFTLARKPL*

Click here to download the sequence:
Link to NCBI Protein BLAST