Transcript Information: R_Transcript_47928.p1


Annotated TAIR IDAT1G05410.1
Annotated Gene NameProtein of unknown function (DUF1423)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:1585504-1587268 | Reverse length=471
E-Value3E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.616295678375
Replicate 27.1377001415207
Replicate 36.7640242529582
Condition 2: 8 Hour
Replicate 15.7113431886875
Replicate 25.6040919750862
Replicate 38.0623779182364
Condition 3: 24 Hour
Replicate 12.7344286524313
Replicate 23.1194783046226
Replicate 36.2458710644992


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47928.p1 GENE.R_Transcript_47928~~R_Transcript_47928.p1 ORF type:complete len:403 (+),score=66.28,PHD_Oberon|PF07227.7|8.5e-35,PHD_Oberon|PF07227.7|9.4e+03,PHD_Oberon|PF07227.7|2.5e+03 R_Transcript_47928:617-1825(+)
ATGGGTTTGCCAGCAAGCTTTCGGTTGAGCAATATGTCCATGCAAGGTTCCCGGGCACGGATGCCAGGGCATTCTTTTCATCATTCAGTTGGAAGATCCCTTCAAAGCATGCATATCTTTCACAAGGGGATTGATATAAGCGCTCATTGTTTTGGAAATATTGGTGCTTTTGGTCCCGAAGATGCGCAGGGTGCGGTTCGCATATCATGTGAAGAGATGGTAGAACAATCTCCCTCCGATTCTCTGTCTGGTATCGCTGTTTGTAAGGCTGGTAATAGATACTGCTGCAGTTTACTGGAAGACGAGATATCTCCTTCTGCAGCTGCCCAATCTTGTGATATTTGCTGCAGTGAACCTGGTTTCTGTCGAGACTGTTGCTGTATTCTTTGTTGCAAAACTGTAGATTTAGCTTTTGGAGGTTATAGTTATATTCGATGTGAGGCAACTGTTCATGATGATTTAATATGTGGTCACATGGCTCATATAAACTGTGCTCGCCGGTCTTATATGGCTGGCACAGTTGGAGGTAGTGTAGGGCTAGATACTGAATACTATTGCCGGCGTTGTGATACAAGAACAGATCTGACAGAGCATGTTACCAAACTTCTGAAGACCTGTGAATCCATTGAATCTAGGGATGACATTGAAAAGATGTTAAATGTTGCTTCCTGTCTGTTACGAGGCTCGCAGAAAAAAGGTTCACAAAGATTGCTAAGTCATATTGATACAGCTTTGGAGAAGCTTAAAGGTGGGGGCAATTTAGAGGAAGTTTGGAAAGTGGAAGTGGATATCATAACAGTCCCAACAGGAGGACAATTGGATTATATGAATTATGCACCTGCAGACATAGGTAAAGACAATCTTTTGCATCAAAATGACTACTTGAAATTGGAGGAGGAAATTGATCAAGTTCTTCAAGAATTAAGGATGTCACAGGAACTTGAATATAAAATCGCACAGGAGAGGCTTCATGCTCAAAAGGATTATCTTTTTAGCTTACATCAACAAGTAGATAAGGGAAAAGCTGAATTGACAAGGCGCACACCATCAACTGATCGTGATGCCCTACTATGTTCCGTTGTGAATAAAGAAGACCACATACAATGTGAGCTAAAAAAGCTGAAGGATATGGAGAAGGTTGCCAAGGGATTTGGGAAGACTCCTAAAGACATTCTAAAGGAACACTTTTATCTGGATCTCGAAAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47928.p1 GENE.R_Transcript_47928~~R_Transcript_47928.p1 ORF type:complete len:403 (+),score=66.28,PHD_Oberon|PF07227.7|8.5e-35,PHD_Oberon|PF07227.7|9.4e+03,PHD_Oberon|PF07227.7|2.5e+03 R_Transcript_47928:617-1825(+)
MGLPASFRLSNMSMQGSRARMPGHSFHHSVGRSLQSMHIFHKGIDISAHCFGNIGAFGPEDAQGAVRISCEEMVEQSPSDSLSGIAVCKAGNRYCCSLLEDEISPSAAAQSCDICCSEPGFCRDCCCILCCKTVDLAFGGYSYIRCEATVHDDLICGHMAHINCARRSYMAGTVGGSVGLDTEYYCRRCDTRTDLTEHVTKLLKTCESIESRDDIEKMLNVASCLLRGSQKKGSQRLLSHIDTALEKLKGGGNLEEVWKVEVDIITVPTGGQLDYMNYAPADIGKDNLLHQNDYLKLEEEIDQVLQELRMSQELEYKIAQERLHAQKDYLFSLHQQVDKGKAELTRRTPSTDRDALLCSVVNKEDHIQCELKKLKDMEKVAKGFGKTPKDILKEHFYLDLEN*

Click here to download the sequence:
Link to NCBI Protein BLAST