Transcript Information: R_Transcript_479291.p2


Annotated TAIR IDAT5G54870.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22289149-22291604 | Forward length=531
E-Value9E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49780802603778
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.20870733843367
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_479291.p2 GENE.R_Transcript_479291~~R_Transcript_479291.p2 ORF type:internal len:110 (+),score=10.71 R_Transcript_479291:2-328(+)
GAGGACTCTTTCCGCTACACCATCAACCGCTACAACGAATCGAGCACGGGCCCCTCTCAGGTCTGCTGCGTCTTCGTCTGCAACATGTGGAAGGCGGGTGGCCTCTTCGATGATATCGAGATCAACTGCGGTGAGCAGACCAACTGGGACGACTACTCCATGAACCTGTTCGACCCCAACGCCAAGGCCAACCGACCCGAGGCCTGTGTTGCTGCTGATCCTGACAACGAGCTCTGCCAGCTGGAGGGCAAGTACACTCTTGAGTTGAACAACTTCAACTCGCGCAAGACCTACTCCCACATGGATGAGAAGTGCGGTGCTTTCCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_479291.p2 GENE.R_Transcript_479291~~R_Transcript_479291.p2 ORF type:internal len:110 (+),score=10.71 R_Transcript_479291:2-328(+)
EDSFRYTINRYNESSTGPSQVCCVFVCNMWKAGGLFDDIEINCGEQTNWDDYSMNLFDPNAKANRPEACVAADPDNELCQLEGKYTLELNNFNSRKTYSHMDEKCGAFP

Click here to download the sequence:
Link to NCBI Protein BLAST