Transcript Information: R_Transcript_47953.p1


Annotated TAIR IDAT3G53520.4
Annotated Gene NameUDP-glucuronic acid decarboxylase 1
Annotated Gene Symbol(s)UXS1
Annotation TypeOrtholog
Chromosome Positionchr3:19841635-19844057 | Forward length=458
E-Value1.4E-253
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 165.062973725691
Replicate 248.717222394498
Replicate 358.111332012359
Condition 2: 8 Hour
Replicate 141.975768480992
Replicate 243.124557836572
Replicate 357.424334981086
Condition 3: 24 Hour
Replicate 165.911123976312
Replicate 260.728189802396
Replicate 360.619864132835


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47953.p1 GENE.R_Transcript_47953~~R_Transcript_47953.p1 ORF type:complete len:434 (+),score=75.71,GDP_Man_Dehyd|PF16363.1|2.9e-61,Epimerase|PF01370.17|6.4e-46,3Beta_HSD|PF01073.15|5.5e-13,NAD_binding_4|PF07993.8|0.03,NAD_binding_4|PF07993.8|8.1e-07,RmlD_sub_bind|PF04321.13|3.9e-10,Polysacc_synt_2|PF02719.11|1.4e-05,Polysacc_synt_2|PF02719.11|63 R_Transcript_47953:197-1498(+)
ATGAAACAACTTCACAAACAAAGCAGTGGGAATGCGTTCAGGAGGGATGAAGAGATGGCGAACTCACCTTACTCACCGAAAACGTTAAAACACCATAGATCTCTTCCTAGATCCCTTAGTTACCTTTTCAAGGAGCAAAGGCTATTATTTATCTTAGTGGGTATCTTGATCGGGTCCACATTTTTCATCCTTCAACCCACTCTATCTCGTCTTGGTCCCCAAGATTCTAATTTCGCTAAATCGATGTCAGGATCGACTACGATCCACGATCTGGTTTCGTATCGCGAAACAAGTTGGGGTGTTGGTGGTGGTAAGGTTGGGAGAGTGCCTGCTGGGATTGGCCGGCGCCGATTGAGGATTGTGGTAACTGGAGGTGCTGGTTTTGTTGGAAGTCATTTGGTTGATAAGCTTATAGCTAGAGGTGATGATATCATTGTTATTGATAACTTCTTTACTGGGAGAAAAGAGAATGTTATGCATCATTTTGGGAATCCAAGGTTTGAATTGATTCGTCATGATGTTGTTGAGCCCATACTCCTTGAAGTTGATCAGATCTATCACCTGGCTTGTCCTGCTTCGCCTGTCCATTACAAGCACAATCCTGTCAAAACTATCAAGACCAATGTGATGGGTACACTTAACATGTTGGGGCTTGCTAAGAGGATTGGTGCGAGGTTTCTTCTTACTAGCACAAGTGAGGTATATGGAGACCCACTTGAGCATCCACAGAAGGAAACATACTGGGGGCATGTGAACCCTATAGGTGTGAGAAGTTGTTACGATGAAGGCAAGCGGACAGCTGAAACTTTAACAATGGATTATCACCGTGGTGCAGATGTTGAGGTACGTATTGCTCGTATTTTCAACACCTATGGACCGAGGATGTGTCTAGATGATGGGCGTGTTGTTAGCAACTTTGTTGCTCAGGCAATCCGGAAGGAACCGATGACGGTTTATGGTGATGGAAAACAAACAAGAAGTTTTCAGTATGTCTCTGACCTGGTGGATGGACTGGTGGCTCTGATGGAAGGTGAGCATATTGGCCCCTTTAATCTTGGAAATCCTGGGGAATTTACCATGTTGGAGCTTGCAGAGGTTGTCAAAGAGACAATTGATCCAAGTGCAACCATAGCCTTTAAGCCAAATACAGCTGATGATCCCCATAAAAGGAAACCAGATATCAGTAAAGCAAAGGAGCTACTGAACTGGGAGCCTAAAGTATCATTAAGGGATGGTCTTCCTCTTATGGTAGCTGATTTCAGGAACCGGATTCTGAATGAGGATGAAGGCAAAGCACATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47953.p1 GENE.R_Transcript_47953~~R_Transcript_47953.p1 ORF type:complete len:434 (+),score=75.71,GDP_Man_Dehyd|PF16363.1|2.9e-61,Epimerase|PF01370.17|6.4e-46,3Beta_HSD|PF01073.15|5.5e-13,NAD_binding_4|PF07993.8|0.03,NAD_binding_4|PF07993.8|8.1e-07,RmlD_sub_bind|PF04321.13|3.9e-10,Polysacc_synt_2|PF02719.11|1.4e-05,Polysacc_synt_2|PF02719.11|63 R_Transcript_47953:197-1498(+)
MKQLHKQSSGNAFRRDEEMANSPYSPKTLKHHRSLPRSLSYLFKEQRLLFILVGILIGSTFFILQPTLSRLGPQDSNFAKSMSGSTTIHDLVSYRETSWGVGGGKVGRVPAGIGRRRLRIVVTGGAGFVGSHLVDKLIARGDDIIVIDNFFTGRKENVMHHFGNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKHNPVKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGADVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRKEPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEHIGPFNLGNPGEFTMLELAEVVKETIDPSATIAFKPNTADDPHKRKPDISKAKELLNWEPKVSLRDGLPLMVADFRNRILNEDEGKAH*

Click here to download the sequence:
Link to NCBI Protein BLAST