Transcript Information: R_Transcript_47958.p1


Annotated TAIR IDAT4G11690.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:7056254-7057954 | Forward length=566
E-Value4E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.23200331951711
Replicate 30.25311312260942
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.4011405661964
Condition 3: 24 Hour
Replicate 10.12683871396522
Replicate 20.36555677719189
Replicate 30.36277963569443


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47958.p1 GENE.R_Transcript_47958~~R_Transcript_47958.p1 ORF type:complete len:181 (-),score=35.51,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|2.5e-10,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|3.1e-11,PPR_2|PF13041.2|3.1e+03,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|25,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|8.3e+02,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|2.2e-06,PPR_1|PF12854.3|8.8e+02,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|2.5e-07,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|4.6e+03,PPR_3|PF13812.2|0.08,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|3.1e+03 R_Transcript_47958:146-688(-)
ATGGCTGTTAATGCTCTATGTAGATTGGGTTTGCTTGAGGAAGCTGTTTCATTGCTAGATGAGATGGAGGAGAATGGATTGAAAATAAGTGTTGTTTGTTTCAATACAATTATGGGTTCTCTTTGTAGGAAGGAGGATTTTGTTGAAGCTAAGAAAATAATGGATAGGATGATCAAGAGTGGTGTGAATCCTGATATGTGCAGCTACATTTGCAGGATGCAAGTTCTTACTAGTGAAGCGAAGTTGAGTGATGCAATTGAGTTGTTAGAGCTATTAAAAGGCAAGGGACTAACCCCTAATGTTGAGCTATACAATGTTTTGATTCAAGGGTTCTGTAAAAATGATGATTTAGATGGAGCAAAGAAGTGGTATCACGAGTTATTGGAACATAATCATGAACCGAATAGGAACACGTTCAACATGTTCCTTTGCTGTGTGACAGCGGTGATTATGGGTTTGCATACACCGTGTGCACGAAGAAGTTCAAGTGCCTATGCTCAGTTGATGAAGCTATTTTGCAGAATGTGGTTAATGGGTTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47958.p1 GENE.R_Transcript_47958~~R_Transcript_47958.p1 ORF type:complete len:181 (-),score=35.51,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|2.5e-10,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|3.1e-11,PPR_2|PF13041.2|3.1e+03,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|25,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|8.3e+02,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|2.2e-06,PPR_1|PF12854.3|8.8e+02,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|2.5e-07,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|4.6e+03,PPR_3|PF13812.2|0.08,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|3.1e+03 R_Transcript_47958:146-688(-)
MAVNALCRLGLLEEAVSLLDEMEENGLKISVVCFNTIMGSLCRKEDFVEAKKIMDRMIKSGVNPDMCSYICRMQVLTSEAKLSDAIELLELLKGKGLTPNVELYNVLIQGFCKNDDLDGAKKWYHELLEHNHEPNRNTFNMFLCCVTAVIMGLHTPCARRSSSAYAQLMKLFCRMWLMGW*

Click here to download the sequence:
Link to NCBI Protein BLAST