Transcript Information: R_Transcript_47958.p2


Annotated TAIR IDAT1G55890.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20901364-20902560 | Forward length=398
E-Value1E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22396271110084
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.1502200303512
Replicate 20.2743666483581
Replicate 30.1113595743582
Condition 3: 24 Hour
Replicate 10.14084544311475
Replicate 20.27061667350402
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47958.p2 GENE.R_Transcript_47958~~R_Transcript_47958.p2 ORF type:complete len:163 (-),score=19.15,PPR|PF01535.16|4.4e-06,PPR|PF01535.16|2.3,PPR_2|PF13041.2|2.1e-06,PPR_2|PF13041.2|0.44,PPR_3|PF13812.2|28,PPR_3|PF13812.2|0.055,PPR_3|PF13812.2|3.7 R_Transcript_47958:737-1225(-)
ATGACAAAGACAAGCATATACACTCGTCTCAATCGCATATTTTCATCCACCCAGAAAACATCACTCCCCAAAACATTAGCTCCACCCGAAACACCAGAAATCCCAACAAACTACAAAGAATCCATTAGCGACCTCTTCAGTCAGAGAGACCCAGGAAAGCTCTTTCAAAAGTTCAACTCTTTGTCCATTCATCCTTATGTTCGTCGTCAACATAGACTCTATGAAATCATAATCTACCGGCTCACTAAAGCTAATAGATTGTCTCTAATCGAAGATACCCTTGAAACCCAGAAAAAGTACATTTCTGGGGAAGGCTTTGCTTCCCGCCTCATAACCTTGTATGGTAAAGCCGGCATGTTCGATCATGCACACAAGCTGTTCGACGAAATGCCTGAACGAAGATGTGAACGAGGTGTTAGATCCTTCAATGCCCTTTTGGGAGCTGCTGTTGATTCCAAGAAATTTGACAAGGCTTATGAGCTTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47958.p2 GENE.R_Transcript_47958~~R_Transcript_47958.p2 ORF type:complete len:163 (-),score=19.15,PPR|PF01535.16|4.4e-06,PPR|PF01535.16|2.3,PPR_2|PF13041.2|2.1e-06,PPR_2|PF13041.2|0.44,PPR_3|PF13812.2|28,PPR_3|PF13812.2|0.055,PPR_3|PF13812.2|3.7 R_Transcript_47958:737-1225(-)
MTKTSIYTRLNRIFSSTQKTSLPKTLAPPETPEIPTNYKESISDLFSQRDPGKLFQKFNSLSIHPYVRRQHRLYEIIIYRLTKANRLSLIEDTLETQKKYISGEGFASRLITLYGKAGMFDHAHKLFDEMPERRCERGVRSFNALLGAAVDSKKFDKAYELL*

Click here to download the sequence:
Link to NCBI Protein BLAST