Transcript Information: R_Transcript_479658.p1


Annotated TAIR IDAT3G15970.1
Annotated Gene NameNUP50 (Nucleoporin 50 kDa) protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5408982-5410379 | Reverse length=465
E-Value9E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.10445920605123
Replicate 30.22792773727515
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.11421794640649
Replicate 20.10972765617203
Replicate 30.32668215950593


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_479658.p1 GENE.R_Transcript_479658~~R_Transcript_479658.p1 ORF type:internal len:201 (+),score=40.01,Ran_BP1|PF00638.14|6.3e-17 R_Transcript_479658:3-602(+)
AAGACTGAAAAAAAAGATGATGATGGCGATGAAAATAAGGGTGATGACGATGATAATGATGATAATGGTGAGAGTAATCAACAAAACCAGAATAATGACAGCTCCTCAGATATCCCGTCTACTTTACAAGTTGTTGAAACTGTTACCGGTGAAGAAGGCGAAACTAATCATTTAACTGTGAAAGTTAAAGTCTTTCGATTTGCGAATAAAGTTTGGCGAGAGAGAGGTGTTGGTGTTTTGAAAGTGAATTCTACTCCAAATGGTAGCTCACGACTTATTATGCGAAATGATAAAACATTGCAATTAATCCTAAATGTACCAATATTTCAACAAACAAAACAAAAACGATCCAATGATAAGGATATTCAAATCATTGGAGTGGATGTTGCAGATCCACAAACACCTCATTATGAACCATTGTTAATTCGTACAAAAACGAAAGAAGAATCAGAAAAACTTTTTTCATCGATCGATTCTCTTTTGAAATCTGCTCCTTCTGCTTCAATCTCATCTTCTGATAATAATACTGATAGTAATACCACCAGCAATACTAGTAGTAGTAGTAGCAGTAGTAGCAGTAGCAGTAGCAGCAGTAGTGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_479658.p1 GENE.R_Transcript_479658~~R_Transcript_479658.p1 ORF type:internal len:201 (+),score=40.01,Ran_BP1|PF00638.14|6.3e-17 R_Transcript_479658:3-602(+)
KTEKKDDDGDENKGDDDDNDDNGESNQQNQNNDSSSDIPSTLQVVETVTGEEGETNHLTVKVKVFRFANKVWRERGVGVLKVNSTPNGSSRLIMRNDKTLQLILNVPIFQQTKQKRSNDKDIQIIGVDVADPQTPHYEPLLIRTKTKEESEKLFSSIDSLLKSAPSASISSSDNNTDSNTTSNTSSSSSSSSSSSSSSSA

Click here to download the sequence:
Link to NCBI Protein BLAST