Transcript Information: R_Transcript_4798.p1


Annotated TAIR IDAT1G25420.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8916141-8917980 | Forward length=323
E-Value4E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.668542640348
Replicate 212.876885149572
Replicate 314.532975514175
Condition 2: 8 Hour
Replicate 19.7647558097775
Replicate 213.71377345547
Replicate 313.654836992376
Condition 3: 24 Hour
Replicate 115.397683397433
Replicate 213.059911608922
Replicate 315.010601099473


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4798.p1 GENE.R_Transcript_4798~~R_Transcript_4798.p1 ORF type:complete len:331 (+),score=63.73,Ist1|PF03398.10|6.5e-65 R_Transcript_4798:194-1186(+)
ATGTCAGTGTTAAATCAGCTCTTCAATCGGGGTGTCCTTGGTGCCAGATGTAAAACATGCTTAAATTTGGCAATCTCCCGTATCAAATTGCTGCAAAATAAGAGAGATGGCCACCTCAAGCAGATGCGGAAGGAGATAGCTCAATTTTTGCAAACTGGCCAAGAAGCCATTGCTAGAATACGGGTGGAGCATGTCATACGAGAACAAAACATCTGGGCTGCATATGAGATCTTGGAGATGTTTTGTGAATTTGTACTTGCACGTATTCCCATTCTTGAAAGTCAGAGGGAATGTCCTCCTGAGTTGCGAGAGGCTATTGCTAGTATAATCTTTGCAGCTCCACGGTGCTCTGATTTGCCAGACCTACTGCAAGTTAAAAACTTATTTACGGCAAAATATGGAAAGGAATTTGTTTCTGCTGTCTCCGAATTGCGGCCTGATACCAGTGTTAACCGTACAATAATTGAGAAGCTTTCGGTTAGCACTCCATCCCCTGCAGTAAAACTCAAGCTGCTTAAAGATATTGCACGAGAGTATAATGTTATCTGGGATTCTTCTGAAACTGAATTAGAATTCAGCAAGAAACATGATGATCTGTTGGACGGTTCAAAGCCTGCTGGCGAAAGAACTGTACCTTCTGTTTCCCCCATCCAGCACAAGGCTCCTGATTCCTCACCTTCCAATGGGACACAATATACCACACCTTCAATTCCAATTGCTGAGCCAAGCACTCGTGGCCCTCAATCGTCTAGCCTACACAGCAACATGGTATCGATGAATTCTAATGGTACAGGAGTAGCAAAGACAAGTAGCATTCAGAAAGGATCTACTCGCAACATTCAAAAAGATACGGGAGCAAAATCACCCGACATTTTGGAGAAAGCTCGAGCGGCCATTGCCTCTGCAGAGCGTGCATCAGCTGCAGCCCGAGCAGCTGCCCAGTTGGTGAGTGCTAATTTTGGGTCTTTGACACTTGGAGAAGAGAAATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4798.p1 GENE.R_Transcript_4798~~R_Transcript_4798.p1 ORF type:complete len:331 (+),score=63.73,Ist1|PF03398.10|6.5e-65 R_Transcript_4798:194-1186(+)
MSVLNQLFNRGVLGARCKTCLNLAISRIKLLQNKRDGHLKQMRKEIAQFLQTGQEAIARIRVEHVIREQNIWAAYEILEMFCEFVLARIPILESQRECPPELREAIASIIFAAPRCSDLPDLLQVKNLFTAKYGKEFVSAVSELRPDTSVNRTIIEKLSVSTPSPAVKLKLLKDIAREYNVIWDSSETELEFSKKHDDLLDGSKPAGERTVPSVSPIQHKAPDSSPSNGTQYTTPSIPIAEPSTRGPQSSSLHSNMVSMNSNGTGVAKTSSIQKGSTRNIQKDTGAKSPDILEKARAAIASAERASAAARAAAQLVSANFGSLTLGEEKS*

Click here to download the sequence:
Link to NCBI Protein BLAST