Transcript Information: R_Transcript_47983.p1


Annotated TAIR IDAT5G11860.1
Annotated Gene NameSCP1-like small phosphatase 5
Annotated Gene Symbol(s)SSP5
Annotation TypeOrtholog
Chromosome Positionchr5:3822024-3823395 | Reverse length=305
E-Value3.2E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.5577276613
Replicate 218.66337814782
Replicate 321.080838222546
Condition 2: 8 Hour
Replicate 116.501343768796
Replicate 219.336221495518
Replicate 324.333680904142
Condition 3: 24 Hour
Replicate 129.390429542713
Replicate 226.956427532928
Replicate 331.404098029027


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47983.p1 GENE.R_Transcript_47983~~R_Transcript_47983.p1 ORF type:complete len:414 (+),score=86.08,NIF|PF03031.14|5.4e-56 R_Transcript_47983:476-1717(+)
ATGCAGACCAAGAAAAGAATTTCTTCTAGAACTTCTCCCCGAGAGGGTGCCAATACCAGAGTCTCTAGATCCCAGAAGAAAGCATCTGAAAATGTTCAAGTTGTTCAGAACAAAGTACCAGATATTATTACATCATCCGCTAGAAAATCAAAATCTGGTAGGGCCCTTGCTAATAGAGATGCTGATTCAACAACTACAACAAACTTGAGCAGTCGATATAAAGTGTTGCAAGATGATGCCTCCAATCTGTATATGAAGAATGATGAAGTTAGTAGTACTTCTACGGTCCTCAAGGAACGTAATGAGGGGACTGCTGATCATTGTGGCTCGGGAACTATCTTTTCACCATCATTTCACTTGTCAAAAAGCGTAGAAGAGTTTGCTCATGCAGACTTGTCTGATAATGCAGATGCGCCAGAAGCCTGCCTGTCTTCTGAGGTCTCCGCCATTTATCTTGCTATGAAAAATTCAAAGCGGGAATGCTTAGATGAACATGGGCAAGATTCTATTATGGTTGATGTATCCATGGAGGAAGAGGAATATGAGGAATTTGATGACTTTGATCCATATTTCTTTATGAAGAACTTGCCCGAATTGTCATCAGTTGTCCCAACGTTTCGGCCTTTGCTGCTACCCAAACAAACGCGGAGATGTCCCCCAACTACTCTTGTCTTGGACTTGGATGAGACCTTAGTCCATTCCAGTCTTGAACCCTGTGATGATGCAGACTTTACATTTAATGTTAACTTTAACCAGAGGGATCATACAGTCTATGTTCGATGCCGCCCATACCTTCAAGATTTTATGGAAAGGGTTGCCAGCCTTTTTGAGATAATTATTTTTACTGCCAGCCAAAGTATTTATGCTGAACAGCTCCTCAATGTATTGGATCCAAAGAGACGGATATTTCGACATCGTGTTTTTCGTGAATCATGTGTTTATGTGGATGGGAACTACTTAAAAGATTTGTCTGTTCTTGGTCGTGATTTGGCACGTGTAATCATAATTGATAATTCTCCACAGGCATTTGGATTTCAAGTTGACAACGGAATTCCCATCGAGAGTTGGTTTGATGACCGTTCAGATAAGGAATTATTGCAGTTACTTCCATTTCTTGAGAGCTTGGTCGAGGTAGAAGATGTTCGACCTGTGATCGCTCAAAAGTTTAATCTGAGGGAGAGAATAGCTGCTGCTGTTTATCCACCTTCAAACTTTGATAATGGGGATCCTTTCGATAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47983.p1 GENE.R_Transcript_47983~~R_Transcript_47983.p1 ORF type:complete len:414 (+),score=86.08,NIF|PF03031.14|5.4e-56 R_Transcript_47983:476-1717(+)
MQTKKRISSRTSPREGANTRVSRSQKKASENVQVVQNKVPDIITSSARKSKSGRALANRDADSTTTTNLSSRYKVLQDDASNLYMKNDEVSSTSTVLKERNEGTADHCGSGTIFSPSFHLSKSVEEFAHADLSDNADAPEACLSSEVSAIYLAMKNSKRECLDEHGQDSIMVDVSMEEEEYEEFDDFDPYFFMKNLPELSSVVPTFRPLLLPKQTRRCPPTTLVLDLDETLVHSSLEPCDDADFTFNVNFNQRDHTVYVRCRPYLQDFMERVASLFEIIIFTASQSIYAEQLLNVLDPKRRIFRHRVFRESCVYVDGNYLKDLSVLGRDLARVIIIDNSPQAFGFQVDNGIPIESWFDDRSDKELLQLLPFLESLVEVEDVRPVIAQKFNLRERIAAAVYPPSNFDNGDPFDR*

Click here to download the sequence:
Link to NCBI Protein BLAST