Transcript Information: R_Transcript_47987.p1


Annotated TAIR IDAT3G02380.1
Annotated Gene NameCONSTANS-like 2
Annotated Gene Symbol(s)COL2, ATCOL2
Annotation TypeOrtholog
Chromosome Positionchr3:487438-488624 | Reverse length=347
E-Value2.4E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.284839355307
Replicate 214.571203021147
Replicate 315.083398253204
Condition 2: 8 Hour
Replicate 11.9401368400823
Replicate 21.4051920282712
Replicate 32.2813499686825
Condition 3: 24 Hour
Replicate 110.538009875012
Replicate 27.2914926933329
Replicate 310.345827625227


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47987.p1 GENE.R_Transcript_47987~~R_Transcript_47987.p1 ORF type:complete len:366 (+),score=58.94,CCT|PF06203.10|3.1e-18,zf-B_box|PF00643.20|0.00011,zf-B_box|PF00643.20|2.5e-07 R_Transcript_47987:309-1406(+)
ATGTTGAAGGCGGAATTAGGAGGAGGAAGAGATACCAACAGCTGGGCACGTCTGTGCGACACTTGCCGTTCAGCGCCATGCACTGTGTACTGCAGAGCTGATTCTGCCTACCTGTGCACTGGCTGCGACACCCGAATCCATGCTGCCAATCAGGTGGCATCTCGCCACGAGCGGGTGTGGGTGTGTGAAGCGTGTGAACGTGCCCCTGCTGCCTTCCTGTGCAAGGCAGATGCAGCATCACTCTGTGCTTCTTGTGATGCCGACATCCACGCGGCTAACCCGCTTGCTCGTCGCCACCAGCGGGTCCCAATCATGCCTGTTGCAGGTTCTCTTTATGGTCCATCTGGGAGGAGGGAAGGAGACTCTGAGGACGGCTTCTTGGGCCCGCAAGATGGAGATGAAGCCATTGATGAGGGAGACGAAGATGAAGCTGCTTCATGGTTGCTACTCAACCCAGGTAAGAACAATAACACCCAAAAGAACATTGGGTTTTTATTAGGAGAGGAGGTTGATCAGTACCTCGACCTCTTTGAGTACAATTCAGGTGCCGAAAACCAGTTCTGCGACCAGTATAATCAGCAGCAGGAGTTCAATGTCCCTGAGAAGAACTGTGGAGGAGACAGCGTGGTGCCAGTTCAGTGTGGCGAAGGCAAGGAGCAGCACTACCAGAACTTCTTGTTCGGGATAGAGTACGAAACTAAATCTGCTTACAATTATACCACGTCAACTAGTCACAGCGTATCTGTTTCCTCCCTAGATGTGGGTGTTGTACCAGACTCTACAATGAGCGAACTGTCATTGTCACACCCAAGGCCTCCCAAGGGCACAATTGACCTCTTCTCTGGCCCTTCCCTCCAAATGCCTACCCAACTATCTCCCTTGGACAGGGAGGCTAGGGTAATGAGATACAGAGAAAAGAAGAAAACAAGGAAGTTTGAAAAGACAATCCGTTATGCTTCAAGAAAGGCATATGCAGAAACCAGACCACGTATCAAAGGACGGTTTGCAAAGAGAACAGATGTTGAAGTGGAGATGGAAAACATGTTCCCAAATTCACTTATAGCCCAAGCTGGATATGGCATAGTTCCATCATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47987.p1 GENE.R_Transcript_47987~~R_Transcript_47987.p1 ORF type:complete len:366 (+),score=58.94,CCT|PF06203.10|3.1e-18,zf-B_box|PF00643.20|0.00011,zf-B_box|PF00643.20|2.5e-07 R_Transcript_47987:309-1406(+)
MLKAELGGGRDTNSWARLCDTCRSAPCTVYCRADSAYLCTGCDTRIHAANQVASRHERVWVCEACERAPAAFLCKADAASLCASCDADIHAANPLARRHQRVPIMPVAGSLYGPSGRREGDSEDGFLGPQDGDEAIDEGDEDEAASWLLLNPGKNNNTQKNIGFLLGEEVDQYLDLFEYNSGAENQFCDQYNQQQEFNVPEKNCGGDSVVPVQCGEGKEQHYQNFLFGIEYETKSAYNYTTSTSHSVSVSSLDVGVVPDSTMSELSLSHPRPPKGTIDLFSGPSLQMPTQLSPLDREARVMRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVEMENMFPNSLIAQAGYGIVPSF*

Click here to download the sequence:
Link to NCBI Protein BLAST