Transcript Information: R_Transcript_479872.p1


Annotated TAIR IDAT5G01450.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:183693-186244 | Reverse length=444
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29440259604385
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.35572998210608
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_479872.p1 GENE.R_Transcript_479872~~R_Transcript_479872.p1 ORF type:5prime_partial len:124 (+),score=18.49,zf-C3HC4_3|PF13920.2|2.1e-14,zf-C3HC4_2|PF13923.2|1e-06 R_Transcript_479872:3-374(+)
GCTATCAGAAATAGAGAATTCTCAGAAGGTGCCATTCAAATGAGACACCAACAGATTAGTGTGCCAATTCCAGTCGCAGCACAACCACAAGCTCAGGCTGCAGCTCCGATACCTACTATGAAGAGAGGAGAAAGCACAAGATCTGGCGAAAACTTGTGCACTATCTGTTATGATAGTGTTCCAAATGCAGTGTTCATGGACTGTGGACATGGTGGCGTTTGTTATGAATGTGCAGTAGAGAACTGGAAGAAGTCTGATTATTGTATATTATGCAGACAGAAGATCAGTAAAGTTTTGAAGATAGTTAACCTCAAGCCGTTAAATATCACTAAAGTTGTGGAATGCACAAGGAAGATAGTTGAAAATGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_479872.p1 GENE.R_Transcript_479872~~R_Transcript_479872.p1 ORF type:5prime_partial len:124 (+),score=18.49,zf-C3HC4_3|PF13920.2|2.1e-14,zf-C3HC4_2|PF13923.2|1e-06 R_Transcript_479872:3-374(+)
AIRNREFSEGAIQMRHQQISVPIPVAAQPQAQAAAPIPTMKRGESTRSGENLCTICYDSVPNAVFMDCGHGGVCYECAVENWKKSDYCILCRQKISKVLKIVNLKPLNITKVVECTRKIVENV*

Click here to download the sequence:
Link to NCBI Protein BLAST