Transcript Information: R_Transcript_47989.p1


Annotated TAIR IDAT3G02380.1
Annotated Gene NameCONSTANS-like 2
Annotated Gene Symbol(s)COL2, ATCOL2
Annotation TypeHomolog
Chromosome Positionchr3:487438-488624 | Reverse length=347
E-Value1E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2327895107337
Replicate 25.5450170238888
Replicate 35.981581330746
Condition 2: 8 Hour
Replicate 11.0898752943878
Replicate 22.3886995438655
Replicate 30.86179753687297
Condition 3: 24 Hour
Replicate 13.5424509668861
Replicate 22.5523890110757
Replicate 34.2216641087487


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47989.p1 GENE.R_Transcript_47989~~R_Transcript_47989.p1 ORF type:complete len:337 (+),score=54.54,CCT|PF06203.10|2.7e-18,zf-B_box|PF00643.20|9.6e-05,zf-B_box|PF00643.20|2.2e-07 R_Transcript_47989:309-1319(+)
ATGTTGAAGGCGGAATTAGGAGGAGGAAGAGATACCAACAGCTGGGCACGTCTGTGCGACACTTGCCGTTCAGCGCCATGCACTGTGTACTGCAGAGCTGATTCTGCCTACCTGTGCACTGGCTGCGACACCCGAATCCATGCTGCCAATCAGGTGGCATCTCGCCACGAGCGGGTGTGGGTGTGTGAAGCGTGTGAACGTGCCCCTGCTGCCTTCCTGTGCAAGGCAGATGCAGCATCACTCTGTGCTTCTTGTGATGCCGACATCCACGCGGCTAACCCGCTTGCTCGTCGCCACCAGCGGGTCCCAATCATGCCTGTTGCAGGTTCTCTTTATGGTCCATCTGGGAGGAGGGAAGGAGACTCTGAGGACGGCTTCTTGGGCCCGCAAGATGGAGATGAAGCCATTGATGAGGGAGACGAAGATGAAGCTGCTTCATGGTTGCTACTCAACCCAGGTGCCGAAAACCAGTTCTGCGACCAGTATAATCAGCAGCAGGAGTTCAATGTCCCTGAGAAGAACTGTGGAGGAGACAGCGTGGTGCCAGTTCAGTGTGGCGAAGGCAAGGAGCAGCACTACCAGAACTTCTTGTTCGGGATAGAGTACGAAACTAAATCTGCTTACAATTATACCACGTCAACTAGTCACAGCGTATCTGTTTCCTCCCTAGATGTGGGTGTTGTACCAGACTCTACAATGAGCGAACTGTCATTGTCACACCCAAGGCCTCCCAAGGGCACAATTGACCTCTTCTCTGGCCCTTCCCTCCAAATGCCTACCCAACTATCTCCCTTGGACAGGGAGGCTAGGGTAATGAGATACAGAGAAAAGAAGAAAACAAGGAAGTTTGAAAAGACAATCCGTTATGCTTCAAGAAAGGCATATGCAGAAACCAGACCACGTATCAAAGGACGGTTTGCAAAGAGAACAGATGTTGAAGTGGAGATGGAAAACATGTTCCCAAATTCACTTATAGCCCAAGCTGGATATGGCATAGTTCCATCATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47989.p1 GENE.R_Transcript_47989~~R_Transcript_47989.p1 ORF type:complete len:337 (+),score=54.54,CCT|PF06203.10|2.7e-18,zf-B_box|PF00643.20|9.6e-05,zf-B_box|PF00643.20|2.2e-07 R_Transcript_47989:309-1319(+)
MLKAELGGGRDTNSWARLCDTCRSAPCTVYCRADSAYLCTGCDTRIHAANQVASRHERVWVCEACERAPAAFLCKADAASLCASCDADIHAANPLARRHQRVPIMPVAGSLYGPSGRREGDSEDGFLGPQDGDEAIDEGDEDEAASWLLLNPGAENQFCDQYNQQQEFNVPEKNCGGDSVVPVQCGEGKEQHYQNFLFGIEYETKSAYNYTTSTSHSVSVSSLDVGVVPDSTMSELSLSHPRPPKGTIDLFSGPSLQMPTQLSPLDREARVMRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVEMENMFPNSLIAQAGYGIVPSF*

Click here to download the sequence:
Link to NCBI Protein BLAST