Transcript Information: R_Transcript_4800.p1


Annotated TAIR IDAT1G25420.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8916141-8917980 | Forward length=323
E-Value5.2E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.874338526115
Replicate 214.462708443855
Replicate 317.577979907622
Condition 2: 8 Hour
Replicate 112.871723567434
Replicate 214.051551126787
Replicate 315.738707698039
Condition 3: 24 Hour
Replicate 119.489860516571
Replicate 214.925613267339
Replicate 316.928254984428


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4800.p1 GENE.R_Transcript_4800~~R_Transcript_4800.p1 ORF type:complete len:331 (+),score=63.10,Ist1|PF03398.10|4.7e-65 R_Transcript_4800:194-1186(+)
ATGTCAGTGTTAAATCAGCTCTTCAATCGGGGTGTCCTTGGTGCCAGATGTAAAACATGCTTAAATTTGGCAATCTCCCGTATCAAATTGCTGCAAAATAAGAGAGATGGCCACCTCAAGCAGATGCGGAAGGAGATAGCTCAATTTTTGCAAACTGGCCAAGAAGCCATTGCTAGAATACGGGTGGAGCATGTCATACGAGAACAAAACATCTGGGCTGCATATGAGATCTTGGAGATGTTTTGTGAATTTGTACTTGCACGTATTCCCATTCTTGAAAGTCAGAGGGAATGTCCTCCTGAGTTGCGAGAGGCTATTGCTAGTATAATCTTTGCAGCTCCACGGTGCTCTGATTTGCCAGACCTACTGCAGGTTAAAAACTTATTTACAGCAAAATATGGAAAGGAATTCGTTTCTGCTGTCTCCGAATTGCGGCCTGATACCAGTGTTAACCGTACAATAATTGAGAAGCTTTCGGTTAGCACTCCATCTCCTCCAGTAAAACTCAAGCTACTTAAAGATATTGCACAAGAGTATAATGTTAACTGGGATTCTTCTGAAACCGAATTAGAATTCAGCAAGAAACATGATGATCTGCTGGATGGTTCAAAACCCGCTGGCGAAAGAACTGTACTTTCTGTTTCCCCCATCCAGCACAAGGCTCATGATTCCTCACCTTCCGATGGGACACAATCTACCAAACCTTCAATTCCGAGGGCTGAGCCAAGCACTCGTGGCCCTCAATCGTCTAGCCTTCACAGCAACATGGTATCGGTGAATTCTAATGGTACAGGAGCATCAAAGACAAGTAGCATTCAGAGAGGATCTACTCGCGACATTCAAAAAGATACAGGAGCACAATCATCCGACATTTTGGAGAAAGCTCGAGCGGCCATTGCCTCTGCAGAGCGTGCATCAGCTGCAGCCCGAGCAGCTGCCCAGTTGGTGAGTGCTAATTTTGGGTCTCTGGAGCTTGGAGAAGGGAAATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4800.p1 GENE.R_Transcript_4800~~R_Transcript_4800.p1 ORF type:complete len:331 (+),score=63.10,Ist1|PF03398.10|4.7e-65 R_Transcript_4800:194-1186(+)
MSVLNQLFNRGVLGARCKTCLNLAISRIKLLQNKRDGHLKQMRKEIAQFLQTGQEAIARIRVEHVIREQNIWAAYEILEMFCEFVLARIPILESQRECPPELREAIASIIFAAPRCSDLPDLLQVKNLFTAKYGKEFVSAVSELRPDTSVNRTIIEKLSVSTPSPPVKLKLLKDIAQEYNVNWDSSETELEFSKKHDDLLDGSKPAGERTVLSVSPIQHKAHDSSPSDGTQSTKPSIPRAEPSTRGPQSSSLHSNMVSVNSNGTGASKTSSIQRGSTRDIQKDTGAQSSDILEKARAAIASAERASAAARAAAQLVSANFGSLELGEGKS*

Click here to download the sequence:
Link to NCBI Protein BLAST