Transcript Information: R_Transcript_480113.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.097090217844249
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.39073188745604
Replicate 20.11894086085737
Replicate 30.096551120321207
Condition 3: 24 Hour
Replicate 10.36634798767613
Replicate 20
Replicate 30.23284792220104


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_480113.p1 GENE.R_Transcript_480113~~R_Transcript_480113.p1 ORF type:5prime_partial len:188 (+),score=17.05,zf-RVT|PF13966.2|4.6e+03,zf-RVT|PF13966.2|2.5e-12 R_Transcript_480113:3-566(+)
ACTATCACTACCCCTAAAAAGAGTGGGGGTATGGGATTGTTCAATGTGTCTATGTGGAATAAAGTAGCTATTTGTAAAATGTGCTGGGATTTCAAATTGAAGAAAGATAAGGTACGGATAAAATGGTTACATGAGTACTATCTAGGGTTTGAACATGTAAGACAAGTGCATGATAACTTGTCTTGGATGCTGAGGAAAATAGTGGAGATAAGGAAGAATATAACTGGGATGAAGGACAACATGAAGATTAAAGAATTCTACCAGCAGATGGCTAATACTAAGCCCAAAGTCTCTTGGTATCAAGTAGTGCGGACTAGCTTTGCTAGGCCGAGAACAAAAATGATCATTTGGTTGTTGATACTTCAAACGCTATTGACAAATGATCGAGCTTCAGTTTGGAATCCTAATTGTCATCAAACCTGCTGTCTTTGTACAGCTGAGAATGAGAGCTGTGAGCACCTCTTTATTCAGTACACATATACCCAAGAGGTCTTCACAAGAGTATTGCAGAAGATGAAAGCTAATTGGAGTCTTGCAACTAGTGTGCTGCAGTATATGGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_480113.p1 GENE.R_Transcript_480113~~R_Transcript_480113.p1 ORF type:5prime_partial len:188 (+),score=17.05,zf-RVT|PF13966.2|4.6e+03,zf-RVT|PF13966.2|2.5e-12 R_Transcript_480113:3-566(+)
TITTPKKSGGMGLFNVSMWNKVAICKMCWDFKLKKDKVRIKWLHEYYLGFEHVRQVHDNLSWMLRKIVEIRKNITGMKDNMKIKEFYQQMANTKPKVSWYQVVRTSFARPRTKMIIWLLILQTLLTNDRASVWNPNCHQTCCLCTAENESCEHLFIQYTYTQEVFTRVLQKMKANWSLATSVLQYME*

Click here to download the sequence:
Link to NCBI Protein BLAST