Transcript Information: R_Transcript_48029.p1


Annotated TAIR IDAT4G08400.1
Annotated Gene NameProline-rich extensin-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:5323800-5325341 | Reverse length=513
E-Value0.0009
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0122607671363
Replicate 22.697667081351
Replicate 33.2268004972908
Condition 2: 8 Hour
Replicate 13.6008624922419
Replicate 24.8806259127046
Replicate 35.3106105375436
Condition 3: 24 Hour
Replicate 14.6910689691284
Replicate 23.687256904307
Replicate 34.6079378288205


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48029.p1 GENE.R_Transcript_48029~~R_Transcript_48029.p1 ORF type:complete len:646 (+),score=127.65,AAA_33|PF13671.2|1.8e-24,SPRY|PF00622.24|5.3e-07,SPRY|PF00622.24|1.1e+04 R_Transcript_48029:58-1995(+)
ATGGCATCATCATCAACAAAGCGCGAAAACCCATCAACAACTGAAGAAGAACAAGAAAGTCAAGCAAAGAGGTTCAAGACTGCTTCAATTGAGTCATCATCTCATCATTCTCATGGCAATCTCAATCCCCGTGTTGTTCTCAACCCTGCTGATTGCAATTTGGATTTCAACGTTGAAGGCGATGGCGTCACAGGGCATGCACTTTATGAGCAGGGATTTGCGTACTGCTGGTCTGGTGCTCGTGCAAGCATTGGAATTACTGGAGGGAAGTACTGTTTTGGATGCAAAATAGTTTCTGGTCAGCCTGTAGATATGCCAGACACTCCTCTTGACCAACAACATGTATGCCGCATTGGAGTTTCAAGAGGCGATGATCCTGTTGGCAACCTTGGCGAAACTGAGTGTAGTTATGGTTTTGGTGGAACCGGGAAATTCTCAAATGCTGGCCGATTCTTGGACTATGGTGAAAGGTTCGGGATTGGCGATACAATTTTGTGCTTAGTGGATCTTGAAAGCAAGCCATGGGGTTCAATTGAGTTCTCTAAGAATGGTAAACGGCTAGGCATTGCAAAGCGTATAGATGCAGGTCCCAAAGGTCTTGGAGTGATTGATTCTCCTGTTCGTAAATTATCATGGGAATCAGCCCTGTTTCCTCATGTTTTGTTGAAGAATACTGTGGTAAAGATGCAATTTAGCGTGGAGGATGGACTGATTCTCGAAGATGGCTATAAGCCATGGGCTTCTGCTGTAAAAGATGGAAAAGCAGTCATAGGACCTTCTTTCTCTGATCCAGCTGATTGTCAGTTGATAATGATGGTGGGATTACCAGCTTCTGGCAAAACTACCTGGGCAGAAAAATGGATGAAGGAAAATCCTGAAAAGCGCTATGTCTTGCTTGGAACAAACCTGGCCCTGGAGCAGATGAAGGTGCCCGGGTTATTACGGAAACACAATTACGGTGAACGGTTTGATAGACTAATGGACCGTGCAACTGGGATCTTTAACACTTTGTTATCAAGGGCTTCAAAAGTACCTCGAAATTACATTATTGACCAGACAAATGTTTACAAGAATGCACGGAAGCGTAAATTGAAGCCATTTGCGTCCTGTCAGAAGATTGCTGTTGTGGTTTTCCCAAAACAAGTAGAACTCGAGTTACGAGCTGAGAAAAGATTCCGAGAAATGGGAAAGGAAGTCCCACCCGAAGCAGTTAATGAGATGTTAGCTAACTTTGTTTTTCCAATGGCAAAAGACATGCGTGGTTCAGATGAGTACTTTGATGAGATAATCTTTCCGGAGCTCAATAGGGTTGAAGCACAGCAGCACCTGGATGAGATGAAGCGCACTCTAGCATTGACCTCTAGTGGGGATTCAAGGAGCAATCATCCACCTAATTCTCGGGAAAGTTCTGTGCACTCAGATTCGAGGATGTCAACCTATTCTTTACCTGGTCCTGGATTTGCTTATTCAGGATATAATAGCCCATCATCAGTAGGAGTTCAAGCAGTTCCACAAGGAGGAAGTTGGCCAGTACCTCCTGCATCTGCTGTGCAGCCTTATCCTGCAAATGTAAATACTGGATACAGAGAGCCTGTGCAACATGGAAGAGCGGAACCATTTGCTGCGCCATATCAAAGAAATTTGAATTCAATGCCTTCAAGAGATGCTTATCGAACATACTCAAGTTTTAGCAATCCTTTACCTGTAGAATACCTCACCCGGTATGATAGCTTTACACATGATCCGCCCAGGAGATATGACTCTATCCACTCTTATGAACCTACAGAATATACGAATCCTCCTGGAGATGCCAGAACAGCTTATCAGGCTCCTTATGGGTCATCGTATCAAGCTCCAAATCCAATTCCTTATGGGAGTTTTCCTCCAAATAATCAGTACCCTGGGGACCCACCTTACGGTCTTCGTAGATATTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48029.p1 GENE.R_Transcript_48029~~R_Transcript_48029.p1 ORF type:complete len:646 (+),score=127.65,AAA_33|PF13671.2|1.8e-24,SPRY|PF00622.24|5.3e-07,SPRY|PF00622.24|1.1e+04 R_Transcript_48029:58-1995(+)
MASSSTKRENPSTTEEEQESQAKRFKTASIESSSHHSHGNLNPRVVLNPADCNLDFNVEGDGVTGHALYEQGFAYCWSGARASIGITGGKYCFGCKIVSGQPVDMPDTPLDQQHVCRIGVSRGDDPVGNLGETECSYGFGGTGKFSNAGRFLDYGERFGIGDTILCLVDLESKPWGSIEFSKNGKRLGIAKRIDAGPKGLGVIDSPVRKLSWESALFPHVLLKNTVVKMQFSVEDGLILEDGYKPWASAVKDGKAVIGPSFSDPADCQLIMMVGLPASGKTTWAEKWMKENPEKRYVLLGTNLALEQMKVPGLLRKHNYGERFDRLMDRATGIFNTLLSRASKVPRNYIIDQTNVYKNARKRKLKPFASCQKIAVVVFPKQVELELRAEKRFREMGKEVPPEAVNEMLANFVFPMAKDMRGSDEYFDEIIFPELNRVEAQQHLDEMKRTLALTSSGDSRSNHPPNSRESSVHSDSRMSTYSLPGPGFAYSGYNSPSSVGVQAVPQGGSWPVPPASAVQPYPANVNTGYREPVQHGRAEPFAAPYQRNLNSMPSRDAYRTYSSFSNPLPVEYLTRYDSFTHDPPRRYDSIHSYEPTEYTNPPGDARTAYQAPYGSSYQAPNPIPYGSFPPNNQYPGDPPYGLRRYY*

Click here to download the sequence:
Link to NCBI Protein BLAST