Transcript Information: R_Transcript_48035.p1


Annotated TAIR IDAT4G31980.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15464905-15469204 | Forward length=680
E-Value5E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4741559241159
Replicate 27.5986611030412
Replicate 38.0173581586533
Condition 2: 8 Hour
Replicate 15.888267523028
Replicate 27.826308644415
Replicate 310.199476443837
Condition 3: 24 Hour
Replicate 17.051326505652
Replicate 26.1439649766608
Replicate 37.6606966404141


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48035.p1 GENE.R_Transcript_48035~~R_Transcript_48035.p1 ORF type:complete len:420 (+),score=53.73,DUF247|PF03140.11|1.1e-105 R_Transcript_48035:228-1487(+)
ATGGGTGCTGAATTTCCAATGGAGGATACAATTGAGGAACTAGCTACTACCATTAAGAACAAGTATGAATCATTGCCTCCTTTGTCTTCCAAATGCTGCATCTATAGAGTCCCCAGAAACCTCCGGGTCATAAGTGAAAAGTCATATACTCCTCGCCTTATGTCCATTGGCCCGTTCCATCGAGGCAAAAAAGAGTTGCAACCCATGGAGGAGCAAAAAGTGAGATACCTTCAGAGATTCATAAAACGAAACGAGTATAGGAACTTGGAGGACTATCTGAGTGCATTGATGAAATGGGAGAAGGAAGCCCGGGATTGTTACATGGAAACCATCCATCTCTCGAGCTTAGAGTTCACAGAAATGCTAGTTCTTGATGGCTGTTTCATTCTTGAATTCTTCTTAACATGGCATGGGAAATCTTATGAACCCAATGACCGTGTCTTTCAGAGGCCAGCTTTGAACGAAGCAATAATGCGTGATCTGAAACTGCTGGAAAACCAAATCCCATTTCTCATTCTCGAAGTATTATACCATATTGCTTTTGAAGACAATGAAAAGGCTCAAAACTTCATGGATCTCACTTGTGAATGTATGCTTGGGCTGGGTAAGGTCCCAAATCAATACAAGAAGACTAAGATCTTGCATTTGATCGATTTCTTAAGAACTTACTACCTACCACCAGACAGGAAAGCAATTAGCCCTGATCTTGACTGGGATTTCCCTGATGGAATTTCGGAGCTCTATGATTCTGGTGTGAAATTAATGGTGGACAAAAGCGACAAGTTCCTTGATATCAGATTTGAAAATGGCGTCCTTCATATACCGGAGCTAATGGTGGAAATGTATATAGAAACTAAGCTCAGAAACTTGGTAGCCTTTGAGCAATGCCATTATCCTCGGGAATCCTATGTGGTCGATTATGTTCTGTTCATAGACAGCTTGATCTATGATCGCAAAGATGTTGACGTACTGCTCAACAATGGGATCATATCGAACGCTCCTGGTAGCAGTGAAAATGTTTACAGACTCTTTAGCAATATATCCAAGGGGACTACATATTCACACTCTTGTTACTACTATGCTGATTTATGCAAGCGTCTAAATGATCACTGCGGGACTCCTTGGAACCGATGGAAGGCAATACTGAGGCAAGATTACTTCAACAACCCTTGGTCAATGATTTCCACTGTTGCTGCTATTTTCCTCTTGTTTCTTACCATCATACAGGCCTATTGCGATATTGTACAACTGCAGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48035.p1 GENE.R_Transcript_48035~~R_Transcript_48035.p1 ORF type:complete len:420 (+),score=53.73,DUF247|PF03140.11|1.1e-105 R_Transcript_48035:228-1487(+)
MGAEFPMEDTIEELATTIKNKYESLPPLSSKCCIYRVPRNLRVISEKSYTPRLMSIGPFHRGKKELQPMEEQKVRYLQRFIKRNEYRNLEDYLSALMKWEKEARDCYMETIHLSSLEFTEMLVLDGCFILEFFLTWHGKSYEPNDRVFQRPALNEAIMRDLKLLENQIPFLILEVLYHIAFEDNEKAQNFMDLTCECMLGLGKVPNQYKKTKILHLIDFLRTYYLPPDRKAISPDLDWDFPDGISELYDSGVKLMVDKSDKFLDIRFENGVLHIPELMVEMYIETKLRNLVAFEQCHYPRESYVVDYVLFIDSLIYDRKDVDVLLNNGIISNAPGSSENVYRLFSNISKGTTYSHSCYYYADLCKRLNDHCGTPWNRWKAILRQDYFNNPWSMISTVAAIFLLFLTIIQAYCDIVQLQN*

Click here to download the sequence:
Link to NCBI Protein BLAST