Transcript Information: R_Transcript_48036.p1


Annotated TAIR IDAT4G31980.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15464905-15469204 | Forward length=680
E-Value2E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0258919229748
Replicate 21.2350764950764
Replicate 32.4499184594815
Condition 2: 8 Hour
Replicate 10.52376181705337
Replicate 22.5111150730743
Replicate 33.397360276543
Condition 3: 24 Hour
Replicate 12.700918497377
Replicate 20.94354048729742
Replicate 32.4579775316837


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48036.p1 GENE.R_Transcript_48036~~R_Transcript_48036.p1 ORF type:3prime_partial len:187 (+),score=33.19,DUF247|PF03140.11|1.8e-47 R_Transcript_48036:18-575(+)
ATGGGTGCTGAATTTCCAATGGAGGATACAATTGAGGAACTAGCTACTACCATTAAGAACAAGTATGAATCATTGCCTCCTTTGTCTTCCAAATGCTGCATCTATAGAGTCCCCAGAAACCTCCGGGTCATAAGTGAAAAGTCATATACTCCTCGCCTTATCTCCATTGGCCCCTTCCATCGAGGCAATCCAGTGGTGCAACCCATGGAGGAGCAAAAATTGAGATACCTACAGAGATTCCTTCAAAGAAACGAGAAGAAGAACTTGGCGGACTATCTGAGTGCGTTGCTGAAATGGGAGAAGGAAGCCCGGGATTGTTACATGGAAACCATCCATCTCTCAAGCTCAGAGTTCACAGAAATGCTACTGATTGATGGCTGCTTCATCGTTGAGTTCTTCTTGACGTGGCATGGGAGATCTTATGATCCCAATGACCGTGTCTTTCAGAGGCCAGCTTTGAACGAAGCAATAATGCGTGATCTGAAACTGCTGGAAAACCAAATCCCATTTCTCATTCTCGAAGTATTATACCATATTGCTTTTGAAGACAATGAAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48036.p1 GENE.R_Transcript_48036~~R_Transcript_48036.p1 ORF type:3prime_partial len:187 (+),score=33.19,DUF247|PF03140.11|1.8e-47 R_Transcript_48036:18-575(+)
MGAEFPMEDTIEELATTIKNKYESLPPLSSKCCIYRVPRNLRVISEKSYTPRLISIGPFHRGNPVVQPMEEQKLRYLQRFLQRNEKKNLADYLSALLKWEKEARDCYMETIHLSSSEFTEMLLIDGCFIVEFFLTWHGRSYDPNDRVFQRPALNEAIMRDLKLLENQIPFLILEVLYHIAFEDNEK

Click here to download the sequence:
Link to NCBI Protein BLAST