Transcript Information: R_Transcript_480376.p1


Annotated TAIR IDAT1G18260.1
Annotated Gene NameHCP-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6279047-6282008 | Reverse length=678
E-Value8E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25176497868578
Replicate 20.14480207183654
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.30842595643015
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_480376.p1 GENE.R_Transcript_480376~~R_Transcript_480376.p1 ORF type:internal len:145 (+),score=35.61,Sel1|PF08238.8|6.4e+03,Sel1|PF08238.8|1.2e-09,Sel1|PF08238.8|8.3e-07,Sel1|PF08238.8|5.6e-07,Sel1|PF08238.8|1.7e+02,TPR_11|PF13414.2|0.12,TPR_11|PF13414.2|0.0018,TPR_11|PF13414.2|0.41,TPR_11|PF13414.2|3.9e+02 R_Transcript_480376:1-432(+)
CTCAAGGCTATTGATTTCTTCCAAAGAGGTATGGAAAAGGGTCTTGCTCCATCCTACTTTGCATTGGGTCTCATCCATTTCCACGGAAATGGTGTTGAGAAGAACGTCAACAAGGCATACGAATTGTGGGAGAAGGCAGCATCCTTGGGAGATGGAGCAGCATGCCACGCATTGGGAAATGCATACGAATATGGAAAGGAGATCGAACAAAATTTGTCCAGAGCAATTGAATACTATCAAAAGGGAGCTGATTTGGAGAATGGAAAATGCTTGCAAAAGATGTCTTACTTTTATGAGAAGGGTAAGGGAGTTGAACAAGACACCCAAAGATCTCTCGAGTTGTTGGAGAGAGCAGCAAAGAAGGGAGATGCAGTCTCCTTGAGAACCTTGGGTACCTACTACTCCAGAGGAACCCACGTCGAGAAGGACCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_480376.p1 GENE.R_Transcript_480376~~R_Transcript_480376.p1 ORF type:internal len:145 (+),score=35.61,Sel1|PF08238.8|6.4e+03,Sel1|PF08238.8|1.2e-09,Sel1|PF08238.8|8.3e-07,Sel1|PF08238.8|5.6e-07,Sel1|PF08238.8|1.7e+02,TPR_11|PF13414.2|0.12,TPR_11|PF13414.2|0.0018,TPR_11|PF13414.2|0.41,TPR_11|PF13414.2|3.9e+02 R_Transcript_480376:1-432(+)
LKAIDFFQRGMEKGLAPSYFALGLIHFHGNGVEKNVNKAYELWEKAASLGDGAACHALGNAYEYGKEIEQNLSRAIEYYQKGADLENGKCLQKMSYFYEKGKGVEQDTQRSLELLERAAKKGDAVSLRTLGTYYSRGTHVEKDP

Click here to download the sequence:
Link to NCBI Protein BLAST