Transcript Information: R_Transcript_480450.p1


Annotated TAIR IDAT1G71770.1
Annotated Gene Namepoly(A)-binding protein 5
Annotated Gene Symbol(s)PAB5
Annotation TypeHomolog
Chromosome Positionchr1:26990777-26993489 | Reverse length=682
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.15786692042329
Replicate 30.17223110974551
Condition 2: 8 Hour
Replicate 10.18410424772365
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.65827683268864


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_480450.p1 GENE.R_Transcript_480450~~R_Transcript_480450.p1 ORF type:5prime_partial len:133 (+),score=15.58,PABP|PF00658.14|1.1e-11 R_Transcript_480450:3-401(+)
GTTGTTCCCTTCTCTTCAAATAACAAAGGAAGAGGTGGTGCTTCTAAACCAAGAGGTAGCTCTGGTCCATACTCAGGCCCGAATATGAGACAAAACGCTGGAAAACGAGCTGGTAACCAAAATAATACTAAACCCGCTACACCCGGTGAAATCCCATCTTTATCCTCTCTCGCTTCCGTTCCTCAATATCAACGAAGACAAGTTATTGGTGATCATTTATATCAACTCATTTTAGGACACAAAGGAGATTCTACTCTCGCTGGTAGTCTTACAGGCATTATCTTGCATTCTTATAAAGATCAAGATGACAGCGAATTAATCTCTCTTCTTGAAGATTCGAATGAACTTAAGAATCAAATGGAGGAAGCCTTCAATACGCTTGAAAAAGCCAGACAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_480450.p1 GENE.R_Transcript_480450~~R_Transcript_480450.p1 ORF type:5prime_partial len:133 (+),score=15.58,PABP|PF00658.14|1.1e-11 R_Transcript_480450:3-401(+)
VVPFSSNNKGRGGASKPRGSSGPYSGPNMRQNAGKRAGNQNNTKPATPGEIPSLSSLASVPQYQRRQVIGDHLYQLILGHKGDSTLAGSLTGIILHSYKDQDDSELISLLEDSNELKNQMEEAFNTLEKARQ*

Click here to download the sequence:
Link to NCBI Protein BLAST