Transcript Information: R_Transcript_48052.p1


Annotated TAIR IDAT1G40087.1
Annotated Gene NamePlant transposase (Ptta/En/Spm family)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:14999762-15001868 | Reverse length=390
E-Value2E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0469061188064
Replicate 21.2447104770972
Replicate 32.0012126449057
Condition 2: 8 Hour
Replicate 12.2919686378077
Replicate 22.6163278285318
Replicate 33.2565292064657
Condition 3: 24 Hour
Replicate 13.4382987423707
Replicate 21.9268244896604
Replicate 33.073156664307


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48052.p1 GENE.R_Transcript_48052~~R_Transcript_48052.p1 ORF type:complete len:641 (+),score=138.54,Transposase_24|PF03004.10|2e-28,Transposase_24|PF03004.10|5.7e+03 R_Transcript_48052:370-2292(+)
ATGAGTTTTCGAAGCAAACGGACCAGATTAGCTCATGTCTCCAAAGTTAAAGATATCCAATCAGTTCAAGACATTGTTTCCCAGGTAGTCCGTGATGTTGGTACTGAAGAAGACCAAACTCCGGAAACCATGCTTAGTTCAAGCGGCAATGTGACTACAGACAAACATACGACAACTGAGCCAATTGAACTCCAAGAAACAATTACTGAGGTAGTTGATGATATATCCTACCAACGAAACACTACCTCTAGACCACTTAGCTCTCACCCTACTTGCCAAGGTAGGGCTTCTCGGAAGCGGTCACTTCAGAATCAGTCATTCCATGACATTACTGCCGGGGAAGCTCATTGGTCAGATGATCCTCAAAGGACTGAACCAACACAAGCTACAAGTATGGAGGCAGATGTTGTAGCCAATCAGAATGACGCAGGAAGCCAGCCCCTTACACCTCCACCCAGTCAGCCACCTCCTGACGACTCTCCTTGCCAATATAGTGGCTCTCAAAGGCAGCGACTTTGGGTCCAAGAGGACCAAGAGGAAAGCGACGAACCTGCCGAGCAAAGATTCTCTCAAGCTCGGTCTTCAAAACATGGTAACTGGACTGATGACATAAAATTTGATGAAATGGAGGAGGTGGAGATGATAGGCTTAGACGGGAGACGTGGAAAGAAGGGAGGCAAAATACTTCCTCGTCATGTTTGGTCTCTCAAACCTGGAGTGAGATTTGTGGTTCCTTTTAATGCATTAGACCAACCAGTTAGGAAGGGTGGTTTCGTCCTTGTCAAATTCCTTGGAGATGTAGCGAAGCATGGTGAGCTATGTCCCATTGGCGAAGTCAATTGGCTTAAGGTGGATAAAAGTTATAAAGCTGACATAATAGCCTTGGTTCAGGGAAAGTTTGTCATCCCTAACCGAGAAGCCATTCTTAAAGGCGTACTGAAACATGCTGGAAAGAAATGGAGGGGCTATCGATATGAGCTGAAGATGCAGTACAAAAAACCTGGCAAAACACAAGAACAAGTTGCTAATACTGTGCCAAAAGGGGTTGAGCCAACCCAGTGGATAAAACTTGTACAGTATTGGTTTTCAGACAAGAGTGAGTTTTTGTCTACAAAGGGCAGGGAAGCGCGGGCTTCACGATCACATCTTCACACTACCGGTTCCAAGAGCTTTGCTCAGAAGAGAGATGAATTTGAAAAGACACATGGAAGGGAACCAGGAGCTTTAGAGTGGTTTGTTCAAACTCACCAGAGGAAAGATGGGACGTTTGTAGATAACACATCCAAAGAACTTTTGGATGCTGCTGCAGCAATGATTGCTCAACGTGCTTCCACTTCTTCCTCCTCACAGCGGGTTGCCATTGAGAATCAGGTCTTTAATGAGCTTATGTACTCAGATGATGAGAGACAACAACGACCAATCGGTTATGGGTTTGGAGTTGAGCGAAACAAGATATTTGGGGTTGCAGGAGAGTTGAGGAAGAAAGGATTCTGGCCATCGGGTGCTTCTGTGGAAGCTGTGAGTTTCCCCCAAAATGCAATGCTTGGAGGAGAGCGGAGGAGAAGTAGCTTCATGGCATCGGATACTTCAGCAGAATTGGAGAAGTTGAACTTTGCTGTGGCAGCTATGCGTGAGACCAATGAAAATATGCAAACCCAACTTCGAATGCAATCTAAGCAATTGCGAAAGCAATCCCGACAGTTGCAGTTGCAGTCCCAGCAGATGGAAGGACTGCAAACCCAACTTCAAAAAGTAACTTCTTTGCTGACCAAGTTTTGCGTGATGTTGGGTAATCCACACATTAATTCTGCATCAAAGAGAGTCTCTTATCGTGGTGTCAATTTTGATAATTTGCAGGTTCTGGGTGCTTCAAGTGACTTTAGTGATGATGAGTCTGAAAGTTCACAGTGGGACTCAGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48052.p1 GENE.R_Transcript_48052~~R_Transcript_48052.p1 ORF type:complete len:641 (+),score=138.54,Transposase_24|PF03004.10|2e-28,Transposase_24|PF03004.10|5.7e+03 R_Transcript_48052:370-2292(+)
MSFRSKRTRLAHVSKVKDIQSVQDIVSQVVRDVGTEEDQTPETMLSSSGNVTTDKHTTTEPIELQETITEVVDDISYQRNTTSRPLSSHPTCQGRASRKRSLQNQSFHDITAGEAHWSDDPQRTEPTQATSMEADVVANQNDAGSQPLTPPPSQPPPDDSPCQYSGSQRQRLWVQEDQEESDEPAEQRFSQARSSKHGNWTDDIKFDEMEEVEMIGLDGRRGKKGGKILPRHVWSLKPGVRFVVPFNALDQPVRKGGFVLVKFLGDVAKHGELCPIGEVNWLKVDKSYKADIIALVQGKFVIPNREAILKGVLKHAGKKWRGYRYELKMQYKKPGKTQEQVANTVPKGVEPTQWIKLVQYWFSDKSEFLSTKGREARASRSHLHTTGSKSFAQKRDEFEKTHGREPGALEWFVQTHQRKDGTFVDNTSKELLDAAAAMIAQRASTSSSSQRVAIENQVFNELMYSDDERQQRPIGYGFGVERNKIFGVAGELRKKGFWPSGASVEAVSFPQNAMLGGERRRSSFMASDTSAELEKLNFAVAAMRETNENMQTQLRMQSKQLRKQSRQLQLQSQQMEGLQTQLQKVTSLLTKFCVMLGNPHINSASKRVSYRGVNFDNLQVLGASSDFSDDESESSQWDSE*

Click here to download the sequence:
Link to NCBI Protein BLAST