Transcript Information: R_Transcript_48060.p2


Annotated TAIR IDAT5G56280.1
Annotated Gene NameCOP9 signalosome subunit 6A
Annotated Gene Symbol(s)CSN6A
Annotation TypeOrtholog
Chromosome Positionchr5:22783617-22785530 | Reverse length=317
E-Value2E-183
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.498171297045
Replicate 223.231390460614
Replicate 326.084123778844
Condition 2: 8 Hour
Replicate 122.590185080362
Replicate 226.256003194166
Replicate 333.375542108454
Condition 3: 24 Hour
Replicate 130.511666380046
Replicate 228.458398568487
Replicate 336.856070472775


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48060.p2 GENE.R_Transcript_48060~~R_Transcript_48060.p2 ORF type:complete len:310 (+),score=49.11,JAB|PF01398.17|6.9e-27,MitMem_reg|PF13012.2|6.3e+03,MitMem_reg|PF13012.2|3.4e-25 R_Transcript_48060:4980-5909(+)
ATGGCGGCTTCATCAAGTAGCGGGCTGACGTTCAAGCTTCATCCTCTGGTGATTTTGAACATATCAGATCATTATACGAGGGTCAAGTCACAAGTGCAGCACCAGCAAGGTGGTAACAATAACGGCGACCCTCTGGCCCCAACCAGAGTATATGGTTGTGTCATTGGTGTCCAAAAGGGACGTACCGTTGAGATTTTCAACAGCTTTGAACTTCTTTATGATCCCTCCACTAAGTCCCTTGACCGAACGTTTCTTGAGAAGAAGCAGGAGCTCTACAAGAAAGTTTTTCCCAACTTCTATATACTTGGATGGTATTCAACAGGGGTTGAGGCTCAAGAATCTGATCTGCACATCCATAAAGCTCTGATGAATATTAATGAGAGCCCTGTGTATGTTCTACTCAATCCATCAATCAATCATGCGCAAAAGGATCTCCCTATGACCATCTATGAAAGTGAATTGCATGTCATTGATGGTTTTCCGCAGCTAATTTTCGTGAGTTCGAGCTACACTATTGAGACAGTGGAAGCAGAAAGGATCTCAGTTGACCATGTTGCGCATCTTAAACCAGCTGATGGCGGTTCTGCTGCCACTCAATTGGCTGCTCACTTGACAGGTATACACAGCGCCATCAAGATGTTGAATAGTAGGGTTCGAGTGCTTCATCAATACCTTCTTGCCATGCAGAAAGGTGATATTGCTTGTGAAAATGGACTCTTGAGACAAGTCTCAAGTCTTTTGAGGAGATTGCCTGCTATAGAATCTGGGAAATTTCGAGATGATTTTCTGATGGAATACAACGATACCTTACTGGTTACATATCTTGCAATGTTAACCAATTGTTCTAGTGCTATGAATGAGCTTGTGGACAAAATCAACACTGCATATGACAGACACAATCGAAGAGGAGGGCGAACTGCTTTTATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48060.p2 GENE.R_Transcript_48060~~R_Transcript_48060.p2 ORF type:complete len:310 (+),score=49.11,JAB|PF01398.17|6.9e-27,MitMem_reg|PF13012.2|6.3e+03,MitMem_reg|PF13012.2|3.4e-25 R_Transcript_48060:4980-5909(+)
MAASSSSGLTFKLHPLVILNISDHYTRVKSQVQHQQGGNNNGDPLAPTRVYGCVIGVQKGRTVEIFNSFELLYDPSTKSLDRTFLEKKQELYKKVFPNFYILGWYSTGVEAQESDLHIHKALMNINESPVYVLLNPSINHAQKDLPMTIYESELHVIDGFPQLIFVSSSYTIETVEAERISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVRVLHQYLLAMQKGDIACENGLLRQVSSLLRRLPAIESGKFRDDFLMEYNDTLLVTYLAMLTNCSSAMNELVDKINTAYDRHNRRGGRTAFI*

Click here to download the sequence:
Link to NCBI Protein BLAST