Transcript Information: R_Transcript_480642.p1


Annotated TAIR IDAT5G17200.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5653524-5655336 | Reverse length=421
E-Value7.7E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.23329222684776
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.12754337348725
Replicate 20.24505843211753
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_480642.p1 GENE.R_Transcript_480642~~R_Transcript_480642.p1 ORF type:internal len:180 (+),score=16.28,Glyco_hydro_28|PF00295.13|3.7e-57 R_Transcript_480642:1-537(+)
GAGTGGACCAATTGCCAAAGTACTTGGCTTTATTTTACAAATATACAAGGTCTCAATATTAATGGATCAGGTCATATTGACGGTCAAGGTTCAACTTGGTGGGGAAATGCTCAGACGAATTGTAACCACCCTACGGCTCTGGGTTTTCGTAACTGTGACAACCTTCGCATTCATGGCTTGAAACATTTGAATAGCGCCAGAAATCACATTTCAATATTTGCGAGTAAGAATGTAGATATCTCAAATGTTCATATCAATGCTCCAGAAAACAGCCCCAACACTGATGGAATTGACATTTGTGCCTCCAAAAATGTTCACATTCATGACTCTTTTATTGGAACAGGAGATGATTGTGTTGCAATTAATGCTGGATCATCATATATCAATATCACCAACGTACAATGTGGACCAGGTCATGGTATAAGTGTCGGTAGCTTAGGTGCAAATGGAGCAGATGAGTCAGTAAAAGAGGTACTTGTAAAAAATTGTACATTGATTGGGACAACAAATGGTGCACGAATCAAGACATGGGAGGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_480642.p1 GENE.R_Transcript_480642~~R_Transcript_480642.p1 ORF type:internal len:180 (+),score=16.28,Glyco_hydro_28|PF00295.13|3.7e-57 R_Transcript_480642:1-537(+)
EWTNCQSTWLYFTNIQGLNINGSGHIDGQGSTWWGNAQTNCNHPTALGFRNCDNLRIHGLKHLNSARNHISIFASKNVDISNVHINAPENSPNTDGIDICASKNVHIHDSFIGTGDDCVAINAGSSYINITNVQCGPGHGISVGSLGANGADESVKEVLVKNCTLIGTTNGARIKTWEG

Click here to download the sequence:
Link to NCBI Protein BLAST