Transcript Information: R_Transcript_48125.p1


Annotated TAIR IDAT1G77470.1
Annotated Gene Namereplication factor C subunit 3
Annotated Gene Symbol(s)RFC3, RFC5
Annotation TypeOrtholog
Chromosome Positionchr1:29112194-29114323 | Reverse length=369
E-Value9.9E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5034037743888
Replicate 23.3667537110682
Replicate 34.2073599666402
Condition 2: 8 Hour
Replicate 13.4265933453871
Replicate 24.5634452737113
Replicate 36.2445774145938
Condition 3: 24 Hour
Replicate 19.6382630926804
Replicate 25.3369868452417
Replicate 310.210008017212


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48125.p1 GENE.R_Transcript_48125~~R_Transcript_48125.p1 ORF type:complete len:343 (+),score=39.56,AAA|PF00004.25|2.1e-16,DNA_pol3_delta2|PF13177.2|2e-11,Rad17|PF03215.11|7.8e-09,AAA_19|PF13245.2|9.5e-06,AAA_19|PF13245.2|4.3e+03,AAA_16|PF13191.2|5.8e-06 R_Transcript_48125:95-1030(+)
ATGGCGGAAACAACCACTCCAATGGACGTCGACCACAAACCCGTCAACAACAAAGGCAAAAACGTCGTCGTTCCAGGCGACGGCCGTGCCACACCTTGGGTCGAAAAATACCGCCCTCAATCCCTAGCCGACGTTGCTGCCCATCGCGACATCGTCGACACAATTGATAGGTTGACGAGCGAGAACAAGTTGCCGCATTTGCTGCTGTACGGACCTCCAGGAACTGGAAAAACATCGACAATTCTAGCGGTTGCGAGGAAGCTTTATGGGAATCAGTTTCATAATATGATTTTAGAGCTCAATGCTTCTGATGATCGTGGTATCGATGTCGTTAGGCAACAGATTCAGGACTTTGCTAGCACTCAAAGCTTCTCTTTTGGGTCAAAGTCACATGTAAAATTAGTTTTACTGGATGAGGCAGATGCCATGACAAAGGATGCACAGTTTGCTTTACGCCGAGTGATTGAAAAATACACAAAAAACACAAGATTTGCTCTTATCTGCAACAATGTTAACAAGATCATCCCCGCTCTGCAGTCAAGGTGCACACGCTTCCGGTTTGCTCCTCTTGATTCTGTCCATGTCAATGAGCGGCTGAAACATGTCATAGAAGCAGAAGGGCTTGATGTAACGGAGACTGGCTTAGCAGCACTTGTGAGATTGAGCACTGGTGACATGAGGAAGGCTTTGAATATTTTGCAGTCAACCCATATGGCATCTCAACAAATAACAGAAGAAGCAGTTTACCTTTGCACTGGAAATCCACTGCCTAAGGACATTGAGCAGATATCATATTGGCTCCTCAATGAGACCTTTGCAACTAGTTTTAGCCGTATCCAACAACTTATTTGTTCTTTAATTTTATTTGTGACTGGGTTGCTGAAGTTTTTGTTGTTGTTGTTGTTATTGTTGCTGCTGTTGGTTGTACTTGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48125.p1 GENE.R_Transcript_48125~~R_Transcript_48125.p1 ORF type:complete len:343 (+),score=39.56,AAA|PF00004.25|2.1e-16,DNA_pol3_delta2|PF13177.2|2e-11,Rad17|PF03215.11|7.8e-09,AAA_19|PF13245.2|9.5e-06,AAA_19|PF13245.2|4.3e+03,AAA_16|PF13191.2|5.8e-06 R_Transcript_48125:95-1030(+)
MAETTTPMDVDHKPVNNKGKNVVVPGDGRATPWVEKYRPQSLADVAAHRDIVDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNNVNKIIPALQSRCTRFRFAPLDSVHVNERLKHVIEAEGLDVTETGLAALVRLSTGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSRIQQLICSLILFVTGLLKFLLLLLLLLLLLVVLD*

Click here to download the sequence:
Link to NCBI Protein BLAST