Transcript Information: R_Transcript_48126.p1


Annotated TAIR IDAT1G77470.1
Annotated Gene Namereplication factor C subunit 3
Annotated Gene Symbol(s)RFC3, RFC5
Annotation TypeOrtholog
Chromosome Positionchr1:29112194-29114323 | Reverse length=369
E-Value1.4E-195
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.201227635658
Replicate 29.4839685953513
Replicate 313.756004300562
Condition 2: 8 Hour
Replicate 110.229081962296
Replicate 28.8159090287703
Replicate 310.80565854164
Condition 3: 24 Hour
Replicate 117.383196073196
Replicate 214.914652879007
Replicate 314.001273233133


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48126.p1 GENE.R_Transcript_48126~~R_Transcript_48126.p1 ORF type:complete len:383 (+),score=48.71,Rep_fac_C|PF08542.7|2.6e-17,AAA|PF00004.25|2.6e-16,DNA_pol3_delta2|PF13177.2|2.5e-11,Rad17|PF03215.11|9.8e-09,AAA_19|PF13245.2|1.1e-05,AAA_19|PF13245.2|6.2e+03,AAA_16|PF13191.2|9.3e-06 R_Transcript_48126:86-1150(+)
ATGGCGGAAACAACCACTCCAATGGACGTCGACCACAAACCCGTCAACAACAAAGGCAAAAACGTCGTCGTTCCAGGCGACGGCCGGGCCACACCTTGGGTCGAAAAATATCGGCCTCAATCCCTAGCCGACGTTGCTGCCCATCGCGACATCGTCGACACAATTGATAGGTTGACGAGCGAGAACAAGTTGCCGCATTTGCTGCTGTACGGACCTCCAGGAACTGGAAAAACATCGACAATTCTAGCGGTTGCGAGGAAGCTTTATGGGAATCAGTTTCATAATATGATTTTAGAGCTCAATGCTTCTGATGATCGTGGTATCGATGTCGTTAGGCAACAGATTCAGGACTTTGCTAGCACTCAAAGCTTCTCTTTTGGGTCAAAGTCACATGTAAAATTAGTTTTACTGGATGAGGCAGATGCCATGACAAAGGATGCACAGTTTGCTTTACGCCGAGTGATTGAAAAATACACAAAAAACACAAGATTTGCTCTTATCTGCAACAATGTTAACAAGATCATCCCCGCTCTGCAGTCAAGGTGCACACGCTTCCGGTTTGCTCCTCTTGATTCTGTCCATGTCAATGAGCGGCTGAAACATGTCATAGAAGCAGAAGGGCTTGATGTAACGGAGACTGGCTTAGCAGCACTTGTGAGATTGAGCACTGGTGACATGAGGAAGGCTTTGAATATTTTGCAGTCAACCCATATGGCATCTCAACAAATAACAGAAGAAGCAGTTTACCTTTGCACTGGAAATCCACTGCCTAAGGACATTGAGCAGATATCATATTGGCTCCTCAATGAGACCTTTGCAACTAGTTTTAGCCGAATTTCTGAAATTAAGACAAGGAAGGGATTGGCCTTGGTAGACATCATAAGAGAAGTAACAATGTTTGTTTTTAGGATCAGGATGCCAGCAGATGTTCGGGTCCAACTGATTAACAATTTGGCTGATATAGAGTACAGGCTCACCTTTGGATGTAACGATAAATTGCAGCTTGGAGCTCTAATAGCTTCATTTACAAAAACTCGGTCTGCATTGGTTGCAGCTGCAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48126.p1 GENE.R_Transcript_48126~~R_Transcript_48126.p1 ORF type:complete len:383 (+),score=48.71,Rep_fac_C|PF08542.7|2.6e-17,AAA|PF00004.25|2.6e-16,DNA_pol3_delta2|PF13177.2|2.5e-11,Rad17|PF03215.11|9.8e-09,AAA_19|PF13245.2|1.1e-05,AAA_19|PF13245.2|6.2e+03,AAA_16|PF13191.2|9.3e-06 R_Transcript_48126:86-1150(+)
MAETTTPMDVDHKPVNNKGKNVVVPGDGRATPWVEKYRPQSLADVAAHRDIVDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGSKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNNVNKIIPALQSRCTRFRFAPLDSVHVNERLKHVIEAEGLDVTETGLAALVRLSTGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFATSFSRISEIKTRKGLALVDIIREVTMFVFRIRMPADVRVQLINNLADIEYRLTFGCNDKLQLGALIASFTKTRSALVAAAK*

Click here to download the sequence:
Link to NCBI Protein BLAST