Transcript Information: R_Transcript_48183.p1


Annotated TAIR IDAT5G25800.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8979761-8982724 | Reverse length=567
E-Value4.3E-239
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5602198013769
Replicate 26.3404669573969
Replicate 37.8245786838343
Condition 2: 8 Hour
Replicate 16.7881605794343
Replicate 26.3097537868692
Replicate 39.0758053101935
Condition 3: 24 Hour
Replicate 19.7741159484285
Replicate 28.0068596632459
Replicate 39.2101727642885


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48183.p1 GENE.R_Transcript_48183~~R_Transcript_48183.p1 ORF type:complete len:606 (+),score=92.23,RNase_T|PF00929.20|1.1e-09,RNase_T|PF00929.20|4.1e+03 R_Transcript_48183:177-1994(+)
ATGCTTTCCTCTGCAACTCCTTTCACTTTCTTTCTCTCTCCTCTCACCTCTCCCCTTTCTCCTCCTCCTACTCAGTTTAAACCCAGAATGAGCTGTTCCTCTGCCTCTACATCACCCAATAACCAAACCCTAACTCCAATTAATGACCACAATGACAATGAAAACAACTACTCTTCCAAAACTTACTTTGATATCTACGGCCCTCAGGCGAGAGCTGAGGTTGAATTGAAGACACCAGAAGCTAATTCCACTTTGAGTTTGCAAGATGTACAAGGGCTAGTCACATGGGTGCTTGCTGATGGTTTCATGCCTTCTTGGGCTTTTATCAAAAACAAGCCTCTAATTCCGAAAGTGGTTCTTCTATATGTGCCAGGCCTTGATGCAGCATTATATATGTCACAGTTAAAATTGTTTACTGGTTTGAAAGAGTGCCTTGGCAACCCTAGGGCAGTTCAGGCTTTGAGCTGTGTGTTAGATGGCATTCAAACAATTGACACCCTTCTGACGTGCAAGTTCAAAAGGAAAAGGGATGAACCTGTTTTACTGTCCAGGAACTCTGACGAGTCAGCTGGGAAAGAATCTAGCTCGTCCTTGTCTAACAACTCATCTCCAAGTGAGCTTATGAAAGAGTTCAACATTGCCTATTATATTCTTACAGAAAAACAGCTGGAACATAATGGATATTGCCTCAGTCAGTCTGGTTTTCTTTGTACCCGTCCGGCACCTTCTGGTTCTCCCCCTTGTGAAATGTTAGCTCTTGACTGCGAGATGTGTGTCACATGCAATGGATTTGAGCTGACACGGGTGACGCTTGTAGATGTTAAAGGTCAGGTTGTGTTAGACAAGCTAGTTAAGCCGTCAAACCCAATTATTGATTACAACACTAGATATAGTGGAATCACACCTGAAATGCTGAGCGATGTTACTACAGGTCTTGAAGACATTCAGGAAGAATTTTTGAAGCTGGTCTACAAAGAGACCATTCTAATTGGACATTCGTTAGAGAATGACTTACTGGCATTGAAAATCTCGCATCATCTAGTTATCGACACTGCAATAATTTACAAGCATCCTCGTGGGGGCTCATATAAAACCGCTCTTCGGGTGCTTGCCAGGAGATTTCTTTCCAAAGCTATACAGGATTCAGGAAGTGGCCATGACAGCATAGAAGATGCAAGAACAGCTATGGAACTGGCTTTACTGAAGTTTAAAAATGGGCCTGACTTTGGCTTACCACAACAATTTATGCGGAAGAAGCTTCTTACTGTTTTGAGTGAATATGGAAAAACATCATCATTTATCGATGATATGTCCATTGTGAAGCGTTATGCTTCTGGGACATGCCATGCTTTGCCCGTCTTCTCTGACGATGAAGCACTCTCAAAAGCTGTAAAAGAGGTGAAAAATGACAAGGTGCATTTTGTTTGGACTCAGTTCTCAGAAATAAATTCCTATTTTAAGAAGCAAGCGGATGATGAAGAAAAATTTAATGCAAGGCTTGCAGAGTTGATATCTTTGCTTACGTGTCAGAATAAGTCTTCTGCTAAAAAGCTCATAAAACGTAGTTTGCCATCGGGTCTCAAAGAAATACTAACTCGCACGGATTCCCGAATTCACAATCTTTATACAAGTTTGCCTACGAATACTATGCTCATTGTATTTACGGGCCAGGGAGACACAGCCATAATTCACAGTTTGCGGAAGATGCTAAAAGAGCAAACCAAAACCCCGGTATGCCGAGAAAAGCTTTTAAAGGTCTTGGAAGAGCAGCAGGCCCAAGCCGAAGTAGCATTGTGCTTTGTTGGTATAAAACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48183.p1 GENE.R_Transcript_48183~~R_Transcript_48183.p1 ORF type:complete len:606 (+),score=92.23,RNase_T|PF00929.20|1.1e-09,RNase_T|PF00929.20|4.1e+03 R_Transcript_48183:177-1994(+)
MLSSATPFTFFLSPLTSPLSPPPTQFKPRMSCSSASTSPNNQTLTPINDHNDNENNYSSKTYFDIYGPQARAEVELKTPEANSTLSLQDVQGLVTWVLADGFMPSWAFIKNKPLIPKVVLLYVPGLDAALYMSQLKLFTGLKECLGNPRAVQALSCVLDGIQTIDTLLTCKFKRKRDEPVLLSRNSDESAGKESSSSLSNNSSPSELMKEFNIAYYILTEKQLEHNGYCLSQSGFLCTRPAPSGSPPCEMLALDCEMCVTCNGFELTRVTLVDVKGQVVLDKLVKPSNPIIDYNTRYSGITPEMLSDVTTGLEDIQEEFLKLVYKETILIGHSLENDLLALKISHHLVIDTAIIYKHPRGGSYKTALRVLARRFLSKAIQDSGSGHDSIEDARTAMELALLKFKNGPDFGLPQQFMRKKLLTVLSEYGKTSSFIDDMSIVKRYASGTCHALPVFSDDEALSKAVKEVKNDKVHFVWTQFSEINSYFKKQADDEEKFNARLAELISLLTCQNKSSAKKLIKRSLPSGLKEILTRTDSRIHNLYTSLPTNTMLIVFTGQGDTAIIHSLRKMLKEQTKTPVCREKLLKVLEEQQAQAEVALCFVGIKH*

Click here to download the sequence:
Link to NCBI Protein BLAST