Transcript Information: R_Transcript_481839.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeHomolog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value1E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24337281272958
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.44110517781155
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_481839.p1 GENE.R_Transcript_481839~~R_Transcript_481839.p1 ORF type:5prime_partial len:150 (+),score=24.65,Skp1|PF01466.15|5.3e-34,Skp1_POZ|PF03931.11|9.5e-19 R_Transcript_481839:3-452(+)
ATCATAGACATTGATGAGGAGGTCGCAGTAAAATCTACTTTGATTAAGAATATGATCGAAGATGCTGGAACTGACGAAGAAATTCCACTTCCCAACGTCAAGATGCAAATTTTGAGAAAAGTGTTAGAGTATTGCGAGAAATATAGAAACGAAAATCCTCCTGAAATCGAAAAGCCACTTAAGAGTACTAATTTGGCCGAAGTTGTCCCAGAATACGATGCTAAATACATTGATATTGAGAATTTGGAAGAAATATTCGATATTATTTTGGCCGCCAACTACCTTGACATTAAGCCTTTACTCGATTTATCCTGTGCAAAGATTGCTTCACTCATAAAAGGAAAATCCCCTGAAGAGATCAGAAAAACATTTAATATTCAGAACGACTTTACTCCCGAAGAAGAGGCCCAGATCAGAGAAGAGAATAAATGGGCTGAACAAGCTGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_481839.p1 GENE.R_Transcript_481839~~R_Transcript_481839.p1 ORF type:5prime_partial len:150 (+),score=24.65,Skp1|PF01466.15|5.3e-34,Skp1_POZ|PF03931.11|9.5e-19 R_Transcript_481839:3-452(+)
IIDIDEEVAVKSTLIKNMIEDAGTDEEIPLPNVKMQILRKVLEYCEKYRNENPPEIEKPLKSTNLAEVVPEYDAKYIDIENLEEIFDIILAANYLDIKPLLDLSCAKIASLIKGKSPEEIRKTFNIQNDFTPEEEAQIREENKWAEQAD*

Click here to download the sequence:
Link to NCBI Protein BLAST