Transcript Information: R_Transcript_482772.p1


Annotated TAIR IDAT5G27470.1
Annotated Gene Nameseryl-tRNA synthetase / serine--tRNA ligase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9695087-9697154 | Forward length=451
E-Value1E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24283318343307
Replicate 20.27932993901949
Replicate 30.152372977358
Condition 2: 8 Hour
Replicate 10.054292383475045
Replicate 20.14874200781276
Replicate 30.080494947318789
Condition 3: 24 Hour
Replicate 10.15271268665879
Replicate 20.14670903918344
Replicate 30.048531495979817


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_482772.p1 GENE.R_Transcript_482772~~R_Transcript_482772.p1 ORF type:internal len:451 (+),score=55.12,tRNA-synt_2b|PF00587.21|1.5e-42,Seryl_tRNA_N|PF02403.18|3.1e-26,Seryl_tRNA_N|PF02403.18|4.7e+03 R_Transcript_482772:2-1351(+)
AAAAACGCAATAATGTTGGATATCAACTTATTCAGAGAAGCAAAAGGTGGAAACCCTGATCTCGTTAGAGAATCACAAAGAAGAAGATTCAATGATGTTGCTGATGTTGACAACATTATCGCAAAAGATGAAGAATGGAGACAAGCTCGTGGAAGACTCGATGCTGCCAAAGCAACTCTAAATAAACTCAACCGGGAAATTGGAATGATTATGAAGGACAAATCAAAGTCAAAAGAAGAAAAAGATAAAGAAAAGGAACCCCTCATTGAAGAGCAAAACCAATTGAAGAAAGATATCGCCAACGGAGAGAAAGAAGAAGTTGAAATTAAAAAACAATTAGACTCTATGTTACACAACATTGGTAACATTGTCCACGATTCAGTTCCAGTCAGTGATACAGAGGATGACAACCAAACTCTCCGAGAAGTTGGAGAATTAAAAGATTACAGTGATAGACATTATCATTACGAACTCTTAGCCATGATTGATGGATTTGACTCAGAAAGAGGATCGAAAGTGAGTGGCCACAGAGGTTACTTTTTAAAAGGTTGGGGTGTTAGACTTCAATTAGCACTTGTTACATATGCCACCTCCTTCCTTGCTTCGAAAGGATACACCGTTATGCAAACTCCATACTTTATGAACAAAGAAATTATGGCTGAAACTGCGGAACTCGCTCAATATGACGAAGAATTATATAAAGTAACTGGTGATGATGAAAAATATTTAATCGCCACTTCTGAACAACCCATTTCTGCCTATCATAGAGGAGAATGGCTCGAATCCTCTGAATTGCCATTAAGATATTGCGGATATTCAGCGTGCTTTAGAAAGGAAGCGGGATCATCTGGTAAAGATGTTCGTGGTATTTTCCGTGTACATCAATTCGAAAAAGTTGAACAATTCATTCTCTGCCCACCAGAAGAATCTTGGGCCATCCACGAAGAAATGATTAAAATTGCAGAGGAATTCTTTGCATCATTAGGTATTTCTTACCGAGTCATTGCAATCGTTTCCAGCGCTTTGAATAAGGCAGCTGCCAAGAAATACGATATTGAAGCTTGGTTTCCATGCTTTAAAGAATTTAGAGAAGTTGTTTCTTGCTCTAATTGCACTGATTATCAATCACGACGAATGGAAATTCGATACCGAAGTAAGAAACAAGGTGATGAGAAATCGTATGTTCATATGTTGAACGGTACTCTTTGTGCCACTACTCGAACTATTTGTGCCATCTTAGAAAACCATCAAACACCAGAAGGTATTCGTGTCCCTGAAGTTTTATATCCCTATCTTCAATACACCCCTGTTGATGGTGCTCCTTTAATTATTCCTTACACTAAACCATGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_482772.p1 GENE.R_Transcript_482772~~R_Transcript_482772.p1 ORF type:internal len:451 (+),score=55.12,tRNA-synt_2b|PF00587.21|1.5e-42,Seryl_tRNA_N|PF02403.18|3.1e-26,Seryl_tRNA_N|PF02403.18|4.7e+03 R_Transcript_482772:2-1351(+)
KNAIMLDINLFREAKGGNPDLVRESQRRRFNDVADVDNIIAKDEEWRQARGRLDAAKATLNKLNREIGMIMKDKSKSKEEKDKEKEPLIEEQNQLKKDIANGEKEEVEIKKQLDSMLHNIGNIVHDSVPVSDTEDDNQTLREVGELKDYSDRHYHYELLAMIDGFDSERGSKVSGHRGYFLKGWGVRLQLALVTYATSFLASKGYTVMQTPYFMNKEIMAETAELAQYDEELYKVTGDDEKYLIATSEQPISAYHRGEWLESSELPLRYCGYSACFRKEAGSSGKDVRGIFRVHQFEKVEQFILCPPEESWAIHEEMIKIAEEFFASLGISYRVIAIVSSALNKAAAKKYDIEAWFPCFKEFREVVSCSNCTDYQSRRMEIRYRSKKQGDEKSYVHMLNGTLCATTRTICAILENHQTPEGIRVPEVLYPYLQYTPVDGAPLIIPYTKPC

Click here to download the sequence:
Link to NCBI Protein BLAST