Transcript Information: R_Transcript_482861.p1


Annotated TAIR IDAT1G15820.1
Annotated Gene Namelight harvesting complex photosystem II subunit 6
Annotated Gene Symbol(s)LHCB6, CP24
Annotation TypeOrtholog
Chromosome Positionchr1:5446685-5447676 | Reverse length=258
E-Value8.5E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.06940289336395
Replicate 20.15966768377413
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.25506709324546
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.50316179978503
Replicate 30.083223211737252


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_482861.p1 GENE.R_Transcript_482861~~R_Transcript_482861.p1 ORF type:3prime_partial len:263 (+),score=-42.92,Chloroa_b-bind|PF00504.17|2.1e-45 R_Transcript_482861:40-786(+)
ATGGCGCTCGCCTCCACCTCCGCCACCGCGTCCGCGGCCGTGCTCAAGACGCCCTTCCTCGGGGCGAAGCGCGCGCTCGCCAATGCCGTCGGCGTCGCGGGCGCCAAGCCCGCGCCGCGCCGCGCGCTCGTCGTGTCGGCCAAGAAGTCGTGGATCCCGGCCTTCAAGAGCGACGCCGAGTTCATCAACCCGCCGTGGCTCGATGGCTCGCTCCCCGGTGACTTCGGCTTCGACCCGCTGGGGCTGGGCAAGGACCCGGCGTTCCTCAAGTGGTACAGGGAGGCGGAGCTGATCCACGGGCGGTGGGCGATGGCGGCGGTGCTGGGGATCTTCGTCGGGCAGGCGTGGAGCGGCGTGCCGTGGTTCGAGGCCGGCGCGCAGCCGGAGGCCATCGCGCCCTTCTCCTTCGGCTCCCTCCTCGGGACGCAGCTGCTGCTCATGGGCTGGGTAGAGTCCAAGCGGTGGGTCGACTTCTTCAACCCGGACTCGCAGGCGGTGGAGTGGGCCACGCCGTGGTCGCGCACCGCCGAGAACTTCTCCAACGCCACCGGCGAGCAGGGCTACCCCGGCGGCAAGTTCTTCGACCCGCTCGGCCTCGGCGGCGAGACCAGGGACGGCGTCTACATCCCGGACACCGACAAGCTCGACCGGCTCAAGCTCGCCGAGATCAAGCACGCCCGCCTCGCCATGCTCGCCATGCTCATCTTCTACTTCGAGGCCGGCCAGGGCAAGACGCCGCTCGGCGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_482861.p1 GENE.R_Transcript_482861~~R_Transcript_482861.p1 ORF type:3prime_partial len:263 (+),score=-42.92,Chloroa_b-bind|PF00504.17|2.1e-45 R_Transcript_482861:40-786(+)
MALASTSATASAAVLKTPFLGAKRALANAVGVAGAKPAPRRALVVSAKKSWIPAFKSDAEFINPPWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGAQPEAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQAVEWATPWSRTAENFSNATGEQGYPGGKFFDPLGLGGETRDGVYIPDTDKLDRLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGA

Click here to download the sequence:
Link to NCBI Protein BLAST