Transcript Information: R_Transcript_4829.p1


Annotated TAIR IDAT5G60580.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24354298-24356706 | Forward length=494
E-Value2E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7924473681398
Replicate 23.9946557636576
Replicate 36.8029290308759
Condition 2: 8 Hour
Replicate 13.692763855153
Replicate 24.1505117106609
Replicate 35.6855392894484
Condition 3: 24 Hour
Replicate 12.3437204594408
Replicate 22.8656484869428
Replicate 33.5040640914058


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4829.p1 GENE.R_Transcript_4829~~R_Transcript_4829.p1 ORF type:internal len:431 (+),score=57.35,RINGv|PF12906.3|5.5e-10 R_Transcript_4829:3-1292(+)
AACTCAATTTTTCCTATGTTTACTGCATTCATAACTCTTGTTCATGTCAAAATTTGCTTTGCTTTGCTTTTCTTTTCTTTTTTTTTTTTTTTTCAGGTTGAGAGTTCCTGCAGAGAAACTGAAGGTGCAACAAATTTAACCAACTGGAGAAGACAGGACCTGTTTCTTGATATCCCTTCAAGGAAAGGTCACGTCTGTCAAGATTCTGTAAAAATCAAGAAACCTCCTACACCGATGTCCACACCAAAGAGAGTAAATTTTGCTTTGGCTCGCGCTTCTTCTGATGTAGTGAAACTACTTGAATCCCCTGGTCCTTCTGCATCTGTTCGTGGGCGTTCCCCTTTTAAGAACATTCTACCAAAACTCAACTTTCTTCATCGAAGCTCTTCAGATGTTCAGAAACTCGCGTACATGGTCAATGACCTTCCGTCTGCAACACCAAAGTCATCTTCACTGACGAAGATCTTCAGTCCGAGAATAGACAGGACATCATCTCTACCAGTTGCTTCATATACAAAGCCAGAATCTGCACACTGTGTGAGCACTGGTGCTTCACCTCATTTTCAAGCTAAGGATGTTCACACTACGCGTGAAGCTAAAGTGCACTTTGCTCGTTCACTTTCAGCTCCCCTCAATAAAGAGATGCGTGCAAAGAGGATGGATTCCTTTATCCGTGTAATTCCCTCACCTCGGGTGAAAGGAGGAAATCTTACAACTCCAAAGACAAAATTTCCAGATGATATTGAGAGCACAGAAGAAGACGATGGTGAAGATATACCTGAAGAGGATGCCGTGTGTAGAATATGTTTGATTGAATTATGTGAAGGCAGAGAAACCCTGAATATGGAATGCTCTTGTAAGGGTGACATGGCTCTAGCACACCAAGAATGTGCTTTGAAATGGTTTAGCATCAAAGGGAACAAGACGTGTGATGTATGCAAACAAGAGGTTCGTAATCTACCAGTCACTCTTCTACGTATCCAGAGTACTCTTGGAGTGGATGCAGGAACTAACAGAGCTCAAAGGCTTCAATTTAGCGATTTCAGCGCTTGGCAAGAAGTGCCTGTGCTCGTCATTGTCAGCATGCTCGCGTATTTCTGTTTCTTGGAGCAGCTTCTGGTCGCAAAAATGGGTACAGGAGCAATTGCACTCTCTCTTCCATTTTCTTGCGTATTGGGTCTACTTTCTTCAATGACCTCGTCAACCATGGTGTCGAAAAGATTTGTTTGGATTTATGCGTCTGTGCAGTTCGTTCTGGTTGTCATCTTTGCCCATGTTTTCTATTCAGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4829.p1 GENE.R_Transcript_4829~~R_Transcript_4829.p1 ORF type:internal len:431 (+),score=57.35,RINGv|PF12906.3|5.5e-10 R_Transcript_4829:3-1292(+)
NSIFPMFTAFITLVHVKICFALLFFSFFFFFQVESSCRETEGATNLTNWRRQDLFLDIPSRKGHVCQDSVKIKKPPTPMSTPKRVNFALARASSDVVKLLESPGPSASVRGRSPFKNILPKLNFLHRSSSDVQKLAYMVNDLPSATPKSSSLTKIFSPRIDRTSSLPVASYTKPESAHCVSTGASPHFQAKDVHTTREAKVHFARSLSAPLNKEMRAKRMDSFIRVIPSPRVKGGNLTTPKTKFPDDIESTEEDDGEDIPEEDAVCRICLIELCEGRETLNMECSCKGDMALAHQECALKWFSIKGNKTCDVCKQEVRNLPVTLLRIQSTLGVDAGTNRAQRLQFSDFSAWQEVPVLVIVSMLAYFCFLEQLLVAKMGTGAIALSLPFSCVLGLLSSMTSSTMVSKRFVWIYASVQFVLVVIFAHVFYSV

Click here to download the sequence:
Link to NCBI Protein BLAST