Transcript Information: R_Transcript_48311.p1


Annotated TAIR IDAT5G42690.2
Annotated Gene NameProtein of unknown function, DUF547
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17116630-17119492 | Reverse length=540
E-Value3E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0070599147431
Replicate 20.627475644625
Replicate 30.89520583709101
Condition 2: 8 Hour
Replicate 11.0694975494199
Replicate 21.1308951735772
Replicate 30.41727840506637
Condition 3: 24 Hour
Replicate 10.79164852509325
Replicate 20.65912267948852
Replicate 30.20126624999446


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48311.p1 GENE.R_Transcript_48311~~R_Transcript_48311.p1 ORF type:complete len:435 (+),score=72.41,DUF547|PF04784.10|1.1e-24,Lzipper-MIP1|PF14389.2|4.9e-21 R_Transcript_48311:391-1695(+)
ATGATGAATCATAGAGCCAGAACAACAGCTTTCCTAAATCCCATTAAATCTTCAATGAAACATGATCAAGATAAGCTGAAAATGCAGAGTAATAAGCTCATGGAAGCTCACAAACCAGCCTCGAATCGACGAATCTCAATTAGAGAGAAGAAATTAGCTTTACTCCAAGATGTTGATAGGCTTAAGAAGAAGCTTAGACATGAAGAGAATGTTCATAGAGCTCTTGAACGTGCCTTTACTCGGCCATTGGGGACTCTTCCTCGCTTACCGCCTTATCTTCCTCCATATACACTGGAGCTTTTAGCCGAAATTGCTGTTTTAGAAGAGGAAGTGGTTAGGCTGGAAGAACAAATTGTGGTTTTCAGAAAAGGGTTGTATCAAGAAGCTGTTAATATTTCAACCTCCAAGAAGAATGCAGAAAATTCTAGCGATCCGTGTGACCCTTGTGTGACGAAAACCATCAAAAAGGATGAAACCGGGAATTTGGTTCAATCTGAAATCAATTCAGTTACGAGTACTTCGAAGTCACAAACTGTGAAAAACAAGGAGCAGTCACCCAGTCGGAAACCACAAACGGTGAGAACGCCTACTAGGAGACCTCCAATTGAGAAGAAAACACCCGAGAAGCATTCAGAGCCTCAGAAATTACAGCTCGATTGCAGAATGAACAGCCAAGACAGTGCAGATCAAGCTAGATCTCTGATTCTTAATAATGAGAGAAGGTTAAGCATGGAGAAATTGCCTTCTGTAGCTACATTGTCCTCCGAACAGAACCAGGCAGAGTTTGAGCTTCAGGATCCCTATAATATTTGCTCAGAATTCGGAAAGATAGACATTGGTCCATACAAGAATCTATGTTCAATTGATGCCCGTTCAATAAATCCAAATAGAACCTCTAATTCATTGTTTCTAATTCGTCGACTGAGAATCCTTATTTCAAAACTAGCCTCCGTCAAACTGCAAAGACTCACTCATCAAGAGAAGCTTGCTTTTTGGATGAACATCTACAATTCATGCATGATGAATGCATTTCTTGAACATGGAATACCAGAAAGTCCAGAGACAGTAGTTGCATTGATGCAGAAGGCAACAATAAATGTGGGGGGACACTTGCTAAATGCTTTAACAATCGAGCATTTCATCCTCCGGCTACCTTTCCACTCTAAATATACATTCTCAAGGGGAGCAAAGAATGATGAGATGGTAGCAAGAAGCGTCTTTGGTTTGGAGTTTTCTGAACCTTTGGTTACATTTGCACTCTCTTGTGGGAGCTGGTCCTCTCCTGCTGTAGGTTTATTATCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48311.p1 GENE.R_Transcript_48311~~R_Transcript_48311.p1 ORF type:complete len:435 (+),score=72.41,DUF547|PF04784.10|1.1e-24,Lzipper-MIP1|PF14389.2|4.9e-21 R_Transcript_48311:391-1695(+)
MMNHRARTTAFLNPIKSSMKHDQDKLKMQSNKLMEAHKPASNRRISIREKKLALLQDVDRLKKKLRHEENVHRALERAFTRPLGTLPRLPPYLPPYTLELLAEIAVLEEEVVRLEEQIVVFRKGLYQEAVNISTSKKNAENSSDPCDPCVTKTIKKDETGNLVQSEINSVTSTSKSQTVKNKEQSPSRKPQTVRTPTRRPPIEKKTPEKHSEPQKLQLDCRMNSQDSADQARSLILNNERRLSMEKLPSVATLSSEQNQAEFELQDPYNICSEFGKIDIGPYKNLCSIDARSINPNRTSNSLFLIRRLRILISKLASVKLQRLTHQEKLAFWMNIYNSCMMNAFLEHGIPESPETVVALMQKATINVGGHLLNALTIEHFILRLPFHSKYTFSRGAKNDEMVARSVFGLEFSEPLVTFALSCGSWSSPAVGLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST