Transcript Information: R_Transcript_483167.p1


Annotated TAIR IDAT5G60790.1
Annotated Gene NameABC transporter family protein
Annotated Gene Symbol(s)ATGCN1, GCN1
Annotation TypeHomolog
Chromosome Positionchr5:24453760-24455767 | Reverse length=595
E-Value3E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4569586887134
Replicate 20.43803130214808
Replicate 30.63718324328658
Condition 2: 8 Hour
Replicate 10.30649900490293
Replicate 20.65309946963129
Replicate 30.37868450529319
Condition 3: 24 Hour
Replicate 11.4049283978011
Replicate 20.36809889664385
Replicate 30.70016301501897


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_483167.p1 GENE.R_Transcript_483167~~R_Transcript_483167.p1 ORF type:complete len:719 (+),score=-11.17,ABC_tran|PF00005.23|3.7e-13,ABC_tran|PF00005.23|6.5e-16,AAA_21|PF13304.2|26,AAA_21|PF13304.2|0.0037,AAA_21|PF13304.2|0.0077,AAA_21|PF13304.2|0.17,SMC_N|PF02463.15|0.18,SMC_N|PF02463.15|4,SMC_N|PF02463.15|13 R_Transcript_483167:94-2250(+)
ATGGCCGCTCCTCTCGTCGATGCTACGGGCAAGCCGCTCACCACCGAGCAGATCTGGGCTGCGGTGAACTGGACGGATAAGGCTTCCATCCAGACGACCTTCCCGCCTTACATGCGCGAGCTGCTGTCGTACAAGAAGGCGCCGCCTAAGAACGTCAACATCGAGCTCTTCTCGATGAAGACTCCGTTCGGCGATCGCTACCTGCTGAAGGATACCGATCTCGTGCTCGAGGCGAACAAGCGTCAGGCCCTGTTCGGCGCGAACGCGACGGGCAAGTCGCTCCTCTTCCGCAACATGAACGAGGGCAAGATCAAGGACTTCCCGAAGCACATGCTCATTCACCACTGCAAGGAGTTCGAGAACCACGAGTTGTCGGACACCGTGCTTGGCACGATCGTCAATGCGCACCCGTTCCGCAAGGTGCTCTTCCAGTGCAAGGCGAAGCTTGAGGAGGAGATGAAGAAGGCCGAGGGGGATGCGGACAAGACCGCCGCTCTCAAGGAGAACATGAACTACATCGACTTCCAGCTGAAGACGATCGGTGGTCACAACACCGAGGAGCGCGCGATCAAGATGCTCCGCGTTCTCGGTTTCGATGAGTTCGGCCAGAAGAAGCTTGTGTCGGAGCTGTCGGGTGGTCTCCGCATGCGTGTCGCCCTCTGTATGGCGTTCATCATCGAGCCGGATCTCCTCCTTCTCGATGAGCCGACGAACCATTTGGACTTCCCGTCTGTGCTGTGGCTCGAGAACCGTCTCCGTGGTTACAAGTCGTCCTTCCTTATCGTCTCGCACGATCGCGAGCTTCTCAACAATGTCTGCACGGCTGTGCTCCTGATTGAGGACCTCCAGATCAAGACCTACGCGTGCGGCTTCAAGGAGTTCGAGAAGAAGAAGGCTGCGGATGACAAGAAGAAGTACGAGGAGATTGAGAAGTTCCTTATCAAGCACCAGAACGTCGACCCGTCGACCTTCATCGGTCGTCAGAAGCATGATAAGAAGCAGTGGTCGGAGCAGTACCACGCGAAGCAGATCGCGCTTCAGGGCAAGTTCACGTTCCCGGCCGCGACGCCGCTCGAGAATCCGGAGGGCAAGAAGCCGGAGGAGATCTCGCTCCTTCGCGTCGAGAAGGTGCGCTTCTCGTACAAGCCGGAGACGAATGTCTTCATCTTCAACGATCCGATCGACTTCGATGTCACTGCCGCCACTCGCTGCGGTGTCATGGGCCCGAACGGTGCGGGTAAGTCGACCCTCCTCAAGATCCTCACTGAGCAGCACAAGCCGACTTCGGGTAACCTCTACAAGCACCCGAAGTTCACCCTCGCCTACTTCGGCCAGTACTCGACCCACGAGCTGAACCTCGAGCAGACTCCGGCTGAGTGGATGGGTGCGCAGTTCCCGGGTGAGCTCGCCGGTTCGCTCCGTCAGCACTTGGCGAAGACGTCCGTCGTTGGTGCCGTCCAGGATACTCGTATGGAGGCGCTCTCGTTCTCGCAGAAGTCGTGTATCGTGTTCGCGAAGCTGACGTACCGTTGCCCGCACTTGCTCATTCTCGATGAGCCGACCAACTTCCTCGATCTCGAGTCCGTCGACTCGCTCATCGCCGCGTGCAACAAGTACGCTGGTGCTCTCCTTCTCGTGTCGCACAACCGCGATTTCCTGAAGAAGTGCGCGAAGCAGTACCTGTCCGTCGTGCCGGGTCGTTTCAACCTCTTCGACAACATGAAAGATGCGGAGCGCTCGACTTACACTTTCATTGCCGAGATGGAGGAGGGTGGTGCGGTCGATACCCAGTCGCTCGTCAAGAAGAACGCCGGTGGTGCCTCGGTGCACGCCTCGCAGGATCTCCGCGAGAAGTCGGCCTCGACGCAGGAGGCCGGCCCGGAGGATGGCATCAAGGTGCTTTCGATCTCGGGCTCGTCGCCGTCGCCGATGCCGGTGAAGAAGGCCGCCGCTCCGGCTGTCTCGTACGCCGTCGGCGAGAAGGTCCAGGCGCTCTGGACTGATGGCAAGTGGTATGACGCTGTCATCAAGAAGATCATCCCGGACACCACCAAGTACCAGATCACGTACACTGCCTACGGCAACACCGTGAACATCGAGGGCAAGTCGATCAAGAAGGCTGCGGCTCCGGCCGCCGCGGCGCCGAAGAAGAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_483167.p1 GENE.R_Transcript_483167~~R_Transcript_483167.p1 ORF type:complete len:719 (+),score=-11.17,ABC_tran|PF00005.23|3.7e-13,ABC_tran|PF00005.23|6.5e-16,AAA_21|PF13304.2|26,AAA_21|PF13304.2|0.0037,AAA_21|PF13304.2|0.0077,AAA_21|PF13304.2|0.17,SMC_N|PF02463.15|0.18,SMC_N|PF02463.15|4,SMC_N|PF02463.15|13 R_Transcript_483167:94-2250(+)
MAAPLVDATGKPLTTEQIWAAVNWTDKASIQTTFPPYMRELLSYKKAPPKNVNIELFSMKTPFGDRYLLKDTDLVLEANKRQALFGANATGKSLLFRNMNEGKIKDFPKHMLIHHCKEFENHELSDTVLGTIVNAHPFRKVLFQCKAKLEEEMKKAEGDADKTAALKENMNYIDFQLKTIGGHNTEERAIKMLRVLGFDEFGQKKLVSELSGGLRMRVALCMAFIIEPDLLLLDEPTNHLDFPSVLWLENRLRGYKSSFLIVSHDRELLNNVCTAVLLIEDLQIKTYACGFKEFEKKKAADDKKKYEEIEKFLIKHQNVDPSTFIGRQKHDKKQWSEQYHAKQIALQGKFTFPAATPLENPEGKKPEEISLLRVEKVRFSYKPETNVFIFNDPIDFDVTAATRCGVMGPNGAGKSTLLKILTEQHKPTSGNLYKHPKFTLAYFGQYSTHELNLEQTPAEWMGAQFPGELAGSLRQHLAKTSVVGAVQDTRMEALSFSQKSCIVFAKLTYRCPHLLILDEPTNFLDLESVDSLIAACNKYAGALLLVSHNRDFLKKCAKQYLSVVPGRFNLFDNMKDAERSTYTFIAEMEEGGAVDTQSLVKKNAGGASVHASQDLREKSASTQEAGPEDGIKVLSISGSSPSPMPVKKAAAPAVSYAVGEKVQALWTDGKWYDAVIKKIIPDTTKYQITYTAYGNTVNIEGKSIKKAAAPAAAAPKKK*

Click here to download the sequence:
Link to NCBI Protein BLAST