Transcript Information: R_Transcript_483308.p1


Annotated TAIR IDAT1G53750.1
Annotated Gene Nameregulatory particle triple-A 1A
Annotated Gene Symbol(s)RPT1A
Annotation TypeOrtholog
Chromosome Positionchr1:20065921-20068324 | Reverse length=426
E-Value1.4E-256
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38653329080581
Replicate 20.19761223921222
Replicate 30.21559282443438
Condition 2: 8 Hour
Replicate 10.4032965991311
Replicate 20.10522767925264
Replicate 30.085419344095939
Condition 3: 24 Hour
Replicate 10
Replicate 20.051894726801358
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_483308.p1 GENE.R_Transcript_483308~~R_Transcript_483308.p1 ORF type:internal len:425 (+),score=105.65,AAA|PF00004.25|1e+04,AAA|PF00004.25|4.3e-41 R_Transcript_483308:1-1272(+)
AGCAGTTGCATTTTTAAAAAGATGAACGACGAAGTTGAAGAACAGCAAGAAGAGAAAAAAATCATTCCTTTGGATGAAGATGATATTGCTTTGCTCAAAACATACGGATTGGGTCCATACAACAAGAAAATAAAATTGATTGAAGAGGATATCAAAAAATTGGCCAAAAATGTAAATGAAATTTGTGGTATTAAAGAATCAGACACTGGATTGGCTCCTCCAGCTCAATGGGATCTTGTACATGATAAACAACTATCAACCGAAGAAGCTCCTTTGCAAGTTGCACGTTGTACCAAAATCATCAATGGTGACACCGAAGATGCAAAATATCTCATTAACATCAAACAAATTGCAAAATACGTCGTTGGACTTGGAGATAAAGTTTCTCCAACTGATATTGAAGAAGGAATGAGAGTTGGTGTTGACAGACAAAAACATCAAATTCAAATCCCTTTGCCTCCAAAAATTGATCCTACTGTCACCATGATGCAGGTTGAAGAAAAACCAGATATCACTTACCAAGATGTTGGAGGTTGCAAAGAACAAATCAAAAAATTGAAAGAAGTTGTTGAATTGCCTTTGTTGGAAGTTGATAGATTTGTACAATTGGGTATTGATCCACCAAAGGGAGTTTTGTTATATGGTCCTCCTGGTACTGGAAAGACCTTGTGTGCAAGAGCAGTCGCAAACAGAACTGATGCTTGCTTCATCAGAGTCATTGGTAGCGAATTGGTTCAAAAGTATGTGGGAGAAGGAGCAAGAATGGTCAGAGAATTGTTTCAACTTGCAAGAAGCAAAAAGGCTTGCATCATCTTTTTTGACGAAGTTGATGCCATTGGAGGAACCAGATTTGATGATGGAGCTGGAGGTGATAATGAAGTCCAAAGAACCATGTTGGAATTGATCAATCAGTTGGATGGTTTCGATGCTAGAGGTAACATCAAAGTGTTGATGGCAACCAATCGTCCTGATACCTTGGATCCTGCGTTGTTGAGACATGGTCGTTTGGACAGAAAAGTTGATTTCAGTTTGCCAGATTTGGAAGGAAGAGAACAAATTCTCAAGATTCATACTAAATCCATGAATGTTGAGCGTAACGTTCGTTTTGGTTTGCTTGCGCGTCTCTGTCCTAACACCACTGGTGCTGAGCTTCGTTCTGTTTGTACTGAAGCTGGAATGTTTGCAATTCGTGATCGCCGTAAAGTCATTACCGAAAAGGATTTCATTGACTCTGTCAACAAGGTTATCAAGGGTTACGCAAAGTTCTCCTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_483308.p1 GENE.R_Transcript_483308~~R_Transcript_483308.p1 ORF type:internal len:425 (+),score=105.65,AAA|PF00004.25|1e+04,AAA|PF00004.25|4.3e-41 R_Transcript_483308:1-1272(+)
SSCIFKKMNDEVEEQQEEKKIIPLDEDDIALLKTYGLGPYNKKIKLIEEDIKKLAKNVNEICGIKESDTGLAPPAQWDLVHDKQLSTEEAPLQVARCTKIINGDTEDAKYLINIKQIAKYVVGLGDKVSPTDIEEGMRVGVDRQKHQIQIPLPPKIDPTVTMMQVEEKPDITYQDVGGCKEQIKKLKEVVELPLLEVDRFVQLGIDPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQLARSKKACIIFFDEVDAIGGTRFDDGAGGDNEVQRTMLELINQLDGFDARGNIKVLMATNRPDTLDPALLRHGRLDRKVDFSLPDLEGREQILKIHTKSMNVERNVRFGLLARLCPNTTGAELRSVCTEAGMFAIRDRRKVITEKDFIDSVNKVIKGYAKFSS

Click here to download the sequence:
Link to NCBI Protein BLAST